Scomber japonicus (chub mackerel): 128384018
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Entry
128384018 CDS
T09718
Symbol
lrp10
Name
(RefSeq) low-density lipoprotein receptor-related protein 10
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128384018 (lrp10)
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128384018 (lrp10)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
128384018
NCBI-ProteinID:
XP_053199574
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Position
22:complement(17073424..17081794)
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AA seq
815 aa
AA seq
DB search
MFWRSITTMTVTHNFFALLLFCIAVCSCFEPALSFDHCGHSLQVLDSREGEIRSSAYHSW
SYRFGSTYDCWIIKGSEGEPIVLSFSQFSVRCKKEWVSIKSSAGGEPFLLCGSKLPQPME
FPGGNITVTHHFLPHLFPVSSFRLSYARDTGECPLTSFECLGGRCLPLSWRCNGQVECLG
EGDGLGTDEQGCAAEADPPQNPTHTITRAEEDKAETYPERNGDRDSERHRVADKPESSDR
SAERNLESDLWSLLKEREEEQQTHRDEEPVVVPTTTEWPCGGLLQTFYGTFSPPANRDSA
LFCVWTLDPQDSRPLRLDLQQLVLGSGDTLTVRNREQGKGDVIKIITSASNYKSVQVESH
TGLLSLTYQTLPNSQGSGFNATFHVGTYCPPWEGRCGGASGGCFTQEQRCDGKWDCPETG
KDEEGCRGCSPNQFACGVAGQRAVSSNHFGGRSVCYPVSERCNYQLYCADGSDERDCTVC
QPGTFHCDSDRCVFESWRCDGQVDCKDGTDELNCTVILPRKVITAATVGSLVCGLLLVIA
MGCTCKLYSLRTREYSMFAPISRQEAELIQQQAPPSYGQLIAQGIIPPVEDFPTENPNET
SSLSLRGILQLLRQDAANSPHRRRRPRFVRRAVRRMRRWGLIPRPPSRPSQTSSSTQQQT
DAAPPGQTTTHSAPTTFSSAVEAVNQPVPQKLGLLAQSEQHQSEAPSPLLPPPPPTLPVA
SPPPPPYAPPAPPAATPQTPPVAVPPSSPSLASIFHTLGLSISLFRASPSSSTNSMPLSV
SPSFSSSSSSTSDDEVLLIPLSEDTTSEDDVPMLT
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgttttggaggagcattaccacgatgacggtcactcacaacttctttgctctcctactt
ttctgcatagcagtgtgcagctgttttgagcccgctctcagttttgaccattgtgggcac
tctcttcaagtcttagacagcagagagggagagataaggagctctgcttatcacagctgg
tcctaccgctttggctctacctacgactgctggatcataaagggttcagaaggagaaccc
atcgttctcagcttctcccagttttcagtccggtgtaagaaggaatgggtgtctataaaa
tcctcagctggaggagagccgtttctcctttgtggatccaagttgccacagccaatggaa
ttcccagggggaaacattacagtgacgcaccactttctcccacatctgttccctgtgtcg
tcgtttcggttgagctacgccagagacactggtgaatgcccgttaacatcttttgaatgc
ctcggagggcgctgcctacccctctcctggcgctgtaacggtcaggtggagtgtctcgga
gaaggcgacggtctcggcacagatgaacagggctgtgctgccgaagcggaccccccacaa
aaccccacgcacaccatcacacgggcagaagaggacaaagcagagacgtacccagagagg
aacggtgacagggactcggagaggcacagggtcgcagataaacctgagagctctgatagg
tcagcagagcggaacttggagtctgatctgtggtcgctgctgaaggagagggaggaggag
cagcagacccaccgggacgaagagcccgttgtggtgcccacaactactgagtggccctgc
ggagggcttctccagaccttctatgggaccttttcgcctccagctaatcgtgatagcgca
ctgttctgtgtttggactctggacccccaagactccaggccgctgagactggacctgcag
caactggtgctggggtccggggacaccctcactgtccgcaacagagaacaaggcaaagga
gacgtaatcaaaattatcacgagcgcctccaattacaaatcagtccaagtagaatctcac
actggcctgctgtcgctgacctatcagactcttcccaattcgcaggggagcggctttaat
gctacgttccatgtcgggacctactgccctccgtgggagggccgctgtggcggtgcatca
ggaggctgcttcactcaggagcagcgctgcgacgggaagtgggactgtccagagacaggg
aaggacgaggagggatgccgtggctgcagcccgaaccagtttgcctgtggagtggcgggg
cagagggcggtgtcatcgaaccacttcggtggcaggtcggtgtgttaccccgtcagcgag
agatgcaactaccagttgtactgtgctgacggcagcgacgagagggactgcaccgtgtgc
cagccggggacttttcactgcgacagcgacaggtgtgtgtttgagagctggcgctgtgac
ggccaggtggactgcaaggacggcactgacgagctgaactgcaccgtcatcctgccccgc
aaggtcatcaccgcggcaacagtgggcagcctggtgtgcgggcttctgctggtcattgcc
atgggttgcacttgtaaactgtattcactcaggaccagagagtacagcatgttcgcacca
atcagccgtcaggaagcggaactgatccagcagcaggctcctccgtcttacggtcagctg
atcgcccagggcatcatccccccagtggaggacttccccacagaaaatcccaatgagact
tcatctctttctctgagagggatcctccagctcctccgccaggatgccgccaactcccct
caccgcagacgccggccacgatttgtccgccgagctgttcgccgcatgaggaggtggggt
ctaatccccagacctccatccagaccctcccagacgtccagctccacccagcagcagaca
gacgccgctcctcccggtcagacgacgactcactcggctcccaccaccttctcgtcggcg
gtggaggcggtcaaccagccggtgcctcagaaactcggcctgctggcccagtcggagcag
caccagagcgaagcaccgtctcctctactgccgcctcctcctccgactctacctgtcgct
tcccctcctccgcctccctacgctcccccagctccacccgcggccactccccaaactcct
cccgtcgccgtccccccgagcagcccctctctggcctccatcttccacacgctgggcctg
agcatctccctattcagagcctcgccctcctcctccaccaactccatgcccctctccgtc
tccccgtctttctcctcctcctcctcgtctacctctgacgacgaggtgctgctcatcccc
ctgtctgaagacaccacttcagaggatgatgttcccatgctcacttga
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