Scomber japonicus (chub mackerel): 128384350
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Entry
128384350 CDS
T09718
Symbol
trip6
Name
(RefSeq) thyroid receptor-interacting protein 6
KO
K12792
thyroid receptor-interacting protein 6
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128384350 (trip6)
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF7576
zf-dskA_traR
Motif
Other DBs
NCBI-GeneID:
128384350
NCBI-ProteinID:
XP_053199877
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Position
22:complement(14472043..14479703)
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AA seq
574 aa
AA seq
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MSGPTWLPPRTLDSPERAVPQMSHSAGSAIYRAPNKKGTSDFRPKYGPYDQNGGGGGGGG
GMIANRYMATGPTGGPIHHSSSDHYYPPPHGPKDDRSWSPHIDSYELMHRGPEKPVSHHS
KIDADIDSLTSMLADLDSHPHDSSTQLYDNVPYNKYLSGDHYKPAHQSAGPPQGRASMGY
PPHPQSQYHPAPPYPNEHHAPQYSSAHQQDYYSSSSAPKPYPQPVPASYTTASTPTGPRF
SVQVKTAQPVTYSQTGRQAEQAYTPPPPRQHVSRPPPQTSPQGWYSQHPSSQTQEMHSEE
GYHGSSSGSGGRVNQGPMSKRGMENNQTGSGSSLSPAYQSSKQGVATPRPEEELDRLTKK
LVYDMNHPPSEDYFGRCARCGDNVVGDGSGCIAMEQVFHVECFTCITCHARLRGQPFYAL
DKKSYCESCYISTLERCSKCTKPILDRILRAMGKAYHPRCFTCVVCNCCLDGVPFTVDAT
SQIHCIDDFHRKYAPRCSVCGEPIMPEQGQEETVRIVALDRSFHVNCYVCEECGLLLSSE
GEGRGCYPLDGHILCKSCSARRIQDLSAKISTDC
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcccacctggctgccaccgagaactctggatagcccagagcgagccgtccct
cagatgtcccactctgcagggtcagcaatctaccgagcccccaacaagaagggcacgtct
gacttccggccaaaatatggcccctatgaccagaacggaggaggaggaggtggaggagga
gggatgatagccaataggtacatggcgactggacccacaggtgggcctattcatcattcg
tctagtgatcactattacccccctccacatggtcccaaagatgaccgcagctggagtcct
cacattgacagctacgagctgatgcaccgtggtcctgaaaaaccagtgagtcatcactcc
aaaattgatgctgatattgactcactcaccagtatgcttgctgatctggacagtcaccca
catgactccagcacgcaactgtacgacaatgtgccttacaacaaatacctctcaggggat
cattacaagcctgcacaccagagcgcaggccctcctcagggtcgggcatccatgggctac
ccccctcaccctcagagccaataccacccagcgcccccctaccccaatgagcaccacgca
cctcagtactccagtgcccaccagcaggactactactcatcatcttcggctcctaaaccc
taccctcaacctgtcccagcctcctacaccacagcctccactccaaccggaccccggttc
agcgtccaggtcaagacggcgcagcctgtcacgtattctcagacagggagacaggccgag
caagcctacaccccacccccccctcgccagcatgtgtcacgccccccacctcagacaagt
ccacagggctggtactcccaacacccaagctcgcaaactcaggagatgcactctgaggag
gggtaccatgggagcagctcagggtctggaggaagagttaaccagggtcccatgtctaag
agagggatggaaaataatcaaacagggtcagggtcttcactgagtcctgcttatcagtcc
agcaagcagggggtagcaacacccagacctgaggaggagctggatcggctcaccaagaag
ttggtatatgatatgaaccaccccccttcagaggattattttggtcgctgtgctcgttgt
ggcgacaatgtggtcggagatggcagtggctgtatcgccatggaacaggtgtttcacgtt
gagtgttttacatgtatcacctgccatgcccgtcttcgaggacaacctttctacgccctg
gacaagaagagttactgcgagagttgttacatcagcactctagagcgctgttcaaaatgt
accaagcccatcttggatcgtatcctgcgagctatgggcaaggcataccatcctcgctgc
ttcacatgtgtagtttgtaactgctgtttggacggggtccccttcactgtggatgccacc
tctcagatacactgcatagatgactttcacaggaagtacgcgcctcgctgttcggtgtgt
ggtgagcccatcatgcccgaacagggtcaggaggagactgtcaggatagttgctctggac
cgcagtttccatgtcaactgttacgtctgtgaggaatgcggtctcctcctgtcctcagaa
ggggagggtcgtggctgttacccgctggacggccacatcttatgtaagagctgcagcgcc
cgccgcattcaggacctctcagccaaaatctccactgactgctaa
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