Scomber japonicus (chub mackerel): 128385095
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Entry
128385095 CDS
T09718
Symbol
ppfia2
Name
(RefSeq) liprin-alpha-2 isoform X1
KO
K26226
liprin-alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128385095 (ppfia2)
Membrane trafficking [BR:
sjo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128385095 (ppfia2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Crescentin
DUF3772
Motif
Other DBs
NCBI-GeneID:
128385095
NCBI-ProteinID:
XP_053199915
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Position
23:18574603..18715444
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AA seq
1242 aa
AA seq
DB search
MMCEVMPTISEDTALSQRGSQSSSSDPDSHFEQLMVNMLDERDRLLDTLRETQESLGLAQ
QHLQDVIYDRDSLQRQLSSALPQDIEHLTACVAGGKRARPPEFAALTKELNACREQLLEK
EEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSL
FEHHKALDEKVRERLRVSLERVSALEEELTAANQEIVALREQNAHIQRKVASGDGEDILE
GSETQQKVHSKRLSNGSLESAHDASQVVELQDLLEKQNYELAQMKERMSSLSSRVSEVEQ
ELETARKDLIKSEEMNNKYQRDIKEAMCQKEDMEERIVTLEKRYLSAQRESTSVHDINDK
LENELANKEAFLRQMEEKNRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKA
EERHGSIEERMRHLECQLEEKNQELLRARQREKMNEEHNKRLSDTVDRLLTESNERLQLH
LKERMAALEEKNVLIQDSDGYRKQYEESIHEKTQLAEEIDKLRSELDQFRLRAGSLTEPT
LSRSHLDTSAELRFSLGSLAETQSDHYRSAKVIRRPRRGRMGLRETKAKSLGEHEWRSQQ
LGVLGGHHFESDTEMSDIDDDDRETLFSSMDLLSPSGHSDAQTLAMMLQEQLDAINKEIR
LIQEEKESTELRAEEIENRVASVSLEGLNLARMHHGASITASATASSLASSSPPSGHSTP
KLDPRSPARDMERMGVMTLPSDLRKHRRKIAAVEEDGREDKATIKCETSPPPTPRTVRMT
HTLPASSHNDARGIVASLEAEASALSSVASSQDSLHKQPKKKGIKSSIGRLFGKKEKGRM
GHLATMMDADMAGQEMGVGKLGTQAEKDRRLKKKHELLEEARRKGLPFAQWDGPTVVAWL
ELWLGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSP
SAPPTSRTASGNVWVTHEEMETMAAPSKASDSEEGSWAQTLAYGDMNHEWIGNEWLPSLG
LPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKKLNYDRKELER
RREQSQHEMRDVLVWSNERVIRWVQSIGLRDYANILLESGVHGALVALDDNFDYSSLALL
LQIPNQNTQARQILEREYNNLLALGTDRRLDECDDKDFRGPSWRRQFPPRDVHGISMMPG
SAETLPAGFRLTASGHSRRLPPEVGPSAVQRLDSSTVRTYSC
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgaggacacagcgctgagccagcgcggctct
cagagcagctcctcggacccggactctcactttgagcagctgatggtcaacatgctggac
gagagggaccgactgctggacacgctgagggagacccaggaaagcctcggactggcccag
cagcacctgcaggatgtcatctatgaccgtgactcactgcagcgccagctcagctccgcc
ctgccacaggatattgaacacctgactgcctgtgtggcggggggaaagcgggccagaccg
ccggagtttgctgcgctgaccaaggagctcaacgcctgcagggagcagctgctggagaag
gaggaggagatctctgagctcaaagctgaaaggaacaacaccaggctactgctggaacat
ctggagtgcctggtgtccagacatgaacggtcacttcgtatgacagtggtcaaacgacag
gctcagtctccctcgggagtctccagcgaagttgaggtcctcaaagcactcaagtccttg
tttgaacaccacaaagccctagatgagaaggtaagagagagactacgggtgtcactggaa
agggtgtctgccttggaggaggagctgacagcagccaatcaggagattgtggccttacgg
gaacagaatgctcacatccagaggaaagtggcgtccggagatggggaggacatactggag
ggtagtgaaactcaacaaaaagtccacagcaagcgtctgtccaatggctccctggagtcg
gcccacgatgcgagccaggtggtggagctgcaagacctgctggagaagcagaactatgag
ctggcccagatgaaggagcgcatgtcctccctctcctcccgggtctccgaggtggagcag
gagctggaaaccgcacgcaaggacctcatcaagtcagaggagatgaacaacaagtaccag
agggacatcaaagaggcgatgtgtcagaaggaagacatggaggaacggatcgtcactttg
gagaaacgctacctgagcgcccagcgagagtccacctcggttcatgacatcaatgacaaa
ctggagaacgagttggctaataaagaggcattcctcagacagatggaagagaagaacagg
cagctacaggagaggctggagcttgcagagcagaagcttcagcagaccatgaggaaagcc
gagacgctgccggaggtggaggctgaactggcccagaggatagcagccctcactaaggcg
gaggagcgtcacggaagcattgaggagcgaatgaggcacttggaatgccagctggaggag
aagaaccaggagctgctacgggctcgacagagagaaaagatgaacgaggaacacaacaag
cgtctctctgacacggtggacaggctcctcacagagtccaacgagcgtcttcagctccac
ctgaaggaacgaatggcagctctagaagagaagaatgtgttaattcaagactcagacggt
tacaggaaacagtacgaggagtcaatacacgaaaagacgcagctggcagaggagatagat
aaactgagatcagagctggaccagtttagattgagggcaggctccctcacagaacccacc
ctgtcaaggtctcatctggacacatcagccgagcttcgattctcgttgggatctctggct
gaaacccagtcagaccactaccgctcagccaaggtcatccgccggccaagaagaggtcga
atgggtctgcgggaaaccaaggctaagtcactgggggagcatgaatggcgttcgcagcag
ctcggggttctgggaggccatcacttcgagagcgacacagagatgtcagacatcgatgat
gatgacagggaaacattgtttagctccatggacctcctctcacccagcggccactctgat
gcacaaaccttggccatgatgttgcaagagcagctggacgccatcaacaaggagattcgg
ctgatacaggaggagaaggagtcgacggagctaagggcggaggagattgagaaccgggtg
gccagcgtcagcctcgaaggcctcaacctggcccgtatgcaccacggagcctccatcact
gcctcagccaccgcttcctcccttgcgtcctcctctccacccagcggacactccacccct
aaacttgaccctcgaagccccgctcgtgacatggagcggatgggggtcatgacactgccc
agtgatctgaggaaacataggagaaagatagcagcggtggaagaggatggccgcgaggac
aaggccaccataaagtgtgagacatcgccccctccaacgccacgcaccgtccgaatgaca
cacacactgccagcctcctcgcacaatgatgcacgagggatcgtggcctctctggaggct
gaggccagcgccctgagtagtgtagccagcagccaagactccctccacaagcaaccgaag
aagaaaggcatcaaatcctccatcgggcgacttttcggcaagaaggagaaaggccgaatg
ggacatctagccaccatgatggacgctgacatggcaggccaggaaatgggtgtaggcaag
ctgggaactcaggctgagaaggaccgcagattgaaaaagaaacatgaactattggaggaa
gccaggagaaagggtttacctttcgctcaatgggacggccccacggttgtagcctggctg
gagctgtggttgggaatgccggcctggtacgtggcagcgtgccgtgccaacgtgaagagt
ggagccataatgtcagccctatctgacactgagatccagagggagatcggtatcagtaac
cctcttcaccggctcaaacttcgcttggccatccaggagatggtctccctcaccagcccc
tctgccccgccaacctccagaaccgcgtcaggcaatgtatgggtgacccatgaggagatg
gagaccatggcagccccttccaaagcgtcagactctgaagaggggagctgggcgcagact
ctagcttatggcgacatgaaccatgagtggatagggaacgagtggctgcccagtctagga
ctacctcagtaccgcagctacttcatggagtgcctggtggatgcccgcatgctggaccac
cttacaaagaaggacctgagggtgcacctcaagatggtagacagcttccacagaacaagt
ttacagtatgggatcatgtgtctgaagaagctcaactatgacagaaaggaactggagcga
cgcagagagcaaagccagcatgaaatgagagacgttctggtgtggagtaatgagagggtc
atccgttgggtgcagagtataggcctgcgggactatgccaacatcctgctggagagcggg
gtgcacggagccttggtcgctctggatgataactttgactacagcagcctggcgctgctc
ctccaaatccccaaccaaaacactcaggcacgtcagattctggagcgagagtataataat
ttgctggcgctgggcactgacaggagactggatgagtgtgatgacaaagacttcagaggt
ccatcgtggaggaggcagttcccaccccgggacgtgcacggtatcagtatgatgcccgga
tcagcagagactctccctgctggattccgtctcactgcgtctggtcactcccgaagactg
ccccctgaggttggaccctctgcggtgcagcggctggacagctccacggtgagaacctat
tcctgctga
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