KEGG   Scomber japonicus (chub mackerel): 128385120
Entry
128385120         CDS       T09718                                 
Symbol
tnpo3
Name
(RefSeq) transportin-3 isoform X1
  KO
K15436  transportin-3
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03013  Nucleocytoplasmic transport
sjo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128385120 (tnpo3)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    128385120 (tnpo3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sjo03016]
    128385120 (tnpo3)
Transfer RNA biogenesis [BR:sjo03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    128385120 (tnpo3)
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N TOR1L1_N Importin_rep_3
Other DBs
NCBI-GeneID: 128385120
NCBI-ProteinID: XP_053199949
LinkDB
Position
23:26356635..26374377
AA seq 927 aa
MEGGKPNLSLVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFFELPPETHTALRDSLLTHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNSDISSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTV
VTLLLQTSCVEKTGNDEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMVLFQVLQRDETS
TNLHEAASDCVCSSLYAIENVETNVALALQLFQGVLTLETAYHMAVAREDLDKVLNYCRI
FTELCETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKIND
AALHSIFRPYIQRLLHCLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSME
CFSQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLSEVLQQVVLLPESVHMAVR
YTSIELVGEMSEVVDRNPRFLDPVLNYLMKGLREKPLASAAAKAIHNICSVCRDHMAQHF
QGLLDIARALDTFALSTEAAVGLLKGTALVLGRLPLEKIAECLSDLCAVQVLALKKVSLL
SADSTNGKSADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADN
RIVERCCRCLRFAVRCVGKGSASLLQPLVTQMVGVYQVYPHSCFLYLGSILVDEYGMEEG
CRQGLLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSSIIVHI
IQCAIAATSLDHRDANCSVMKFVRDLIHTGVANDHEEDFEVRKQLIGQAMEQHGQQLITQ
LMHSCCFCLPPYTLPDVAEVLWEVMMFDRPTFCRWLESALKGLPKETSGGAVTVTHKQLT
DFHKQVTSAEECKQVCWAIREFTRLFR
NT seq 2784 nt   +upstreamnt  +downstreamnt
atggaggggggcaagccgaacctgagcctggtgtaccaggcggtgcaggccctgtaccac
gacccggacccggccgggaaggagcgagcctcggtgtggctgggagagctgcagagatcg
atgtacgcgtgggagatctcggaccagctgctgcagctcaaacaggatgtggagtcgtgt
tacttcgccgctcagacgatgaagatgaagatccagacctcgttcttcgagctgccgcca
gaaacccacacggccctccgagactccctgctgacccacatccagaacctcaaagacctg
tcccccatcatcgtcacccagctggcgttggcgatcgctgacctcgccctgcagatggcc
tcgtggaaaggatgcgttcacacgctcatagaaaagtacaacagtgacatcagctccatg
cccttcctgatagagatcctcaccgtgctgccggaggaagttcacagccgctcactgagg
atcggagccaatcggaggacggagatcatcgaggacttagcgtattattcaagcactgtg
gtgaccctgctgttacagacgtcgtgcgtggagaagacggggaacgatgagaagatgctc
atcaaggtgttccgctgtctgggcagctggttcaacctgggggtcctggacagcaacttc
atggccagcaaccagctgctcatggtcctgttccaagtcctgcagagagacgaaacctcc
accaacctccacgaggcggcgtcggactgcgtgtgctcctcgctgtacgccatcgagaac
gtggagaccaacgtggcgttggcgctgcagctgttccagggcgtgctgacgctggagacc
gcctaccacatggccgtggcccgggaggacctcgacaaagtgctgaactactgcaggatc
ttcaccgagctctgtgagaccttcctggagaccaccgtcaggagtccggggcagggcatg
ggggacctgaggaccctggagctgctgctgatctgtgcaggacaccctcagtacgaggtt
gtggagatctcctttaacttctggtaccgtctgggagaacacttgtataagatcaacgac
gccgcgctgcacagcatcttcagaccctacatccagagactcctgcactgcctggcccgg
cactgtcagctggacccagaccacgaagggatcccagaagacacggacgacttcggggag
ttcaggatgagagtgtccgacctcgttaaagacgtcattttcctggttggttctatggag
tgtttctctcagttatattctacattaaaagaagggaaccccccctgggaggtgacagaa
gccgttctcttcatcatggccgccatcgccaaaagtgtcgacccagagaacaaccccacc
ctgtcggaggtgctgcagcaggtggtgttgctccccgagagcgtccacatggcggttcga
tacacgagcatcgagctggtcggagagatgagcgaggtggtcgacaggaacccccgattc
ctcgacccggtgctgaactacctgatgaagggtttgagggagaagcctctggcgtcggcg
gcagcgaaggcgatccacaacatctgctcggtgtgcagagatcacatggctcaacacttc
cagggtctgctggacatcgctcgcgccctcgacaccttcgccctgtccaccgaggccgcc
gtcggactgctcaaaggtacggctctggttctcggtcgtcttcctctggagaagatcgcc
gagtgtctcagcgatctctgtgcggtccaggtcctggccctgaagaaggtcagtcttctg
tctgcagactctacaaacggtaaatcagctgatccgactgtgtggctcgaccggctcgcc
gtcatcttcagacacacaaaccccatcgtagagaacggccagacacacccctgtcagaaa
gtcatccaggagatctggccggtgctgtcggagactctgaacactcatcaggctgataac
aggatcgtggagcgatgctgtcgctgtctcaggttcgctgtacgatgtgttgggaaaggc
tccgcgtcactgctgcagccactggtcactcagatggtgggtgtgtaccaggtgtatcca
cactcctgcttcctgtacctgggcagtatcctggtggacgagtacggcatggaggagggc
tgtaggcagggtctgctggacatgctgcaggccttgtgcatgccgaccttccagctgttg
gagcagcccaacgggttgaggaatcatcccgacactgtggacgacctgttcagactggcc
accaggtttgtgcagcgtagccccgtcacgttgctaagcagcagcatcatcgttcacatc
atccagtgcgccatcgctgcgacctcattggaccaccgagacgccaactgcagcgtgatg
aagtttgtgcgtgacctgatccacaccggcgtggccaacgaccacgaggaggacttcgag
gtgaggaagcagctgattggccaggccatggagcagcacggccagcagctcatcacccag
ctgatgcactcctgctgcttctgcctgccgccgtacacgctgcccgacgtggccgaggtg
ctctgggaggtcatgatgttcgaccggccgacgttttgccgctggttagaaagcgctctg
aaaggtttaccgaaggaaacgtcaggaggagcggtgacggtgactcacaaacagctgaca
gacttccacaaacaggtcacgagcgctgaggagtgtaaacaggtgtgctgggccatcaga
gagttcaccagactgttccgatag

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