Scomber japonicus (chub mackerel): 128385120
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Entry
128385120 CDS
T09718
Symbol
tnpo3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
sjo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128385120 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128385120 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128385120 (tnpo3)
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
128385120 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
TOR1L1_N
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
128385120
NCBI-ProteinID:
XP_053199949
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Position
23:26356635..26374377
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AA seq
927 aa
AA seq
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MEGGKPNLSLVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFFELPPETHTALRDSLLTHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNSDISSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTV
VTLLLQTSCVEKTGNDEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMVLFQVLQRDETS
TNLHEAASDCVCSSLYAIENVETNVALALQLFQGVLTLETAYHMAVAREDLDKVLNYCRI
FTELCETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKIND
AALHSIFRPYIQRLLHCLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSME
CFSQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLSEVLQQVVLLPESVHMAVR
YTSIELVGEMSEVVDRNPRFLDPVLNYLMKGLREKPLASAAAKAIHNICSVCRDHMAQHF
QGLLDIARALDTFALSTEAAVGLLKGTALVLGRLPLEKIAECLSDLCAVQVLALKKVSLL
SADSTNGKSADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADN
RIVERCCRCLRFAVRCVGKGSASLLQPLVTQMVGVYQVYPHSCFLYLGSILVDEYGMEEG
CRQGLLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSSIIVHI
IQCAIAATSLDHRDANCSVMKFVRDLIHTGVANDHEEDFEVRKQLIGQAMEQHGQQLITQ
LMHSCCFCLPPYTLPDVAEVLWEVMMFDRPTFCRWLESALKGLPKETSGGAVTVTHKQLT
DFHKQVTSAEECKQVCWAIREFTRLFR
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggcaagccgaacctgagcctggtgtaccaggcggtgcaggccctgtaccac
gacccggacccggccgggaaggagcgagcctcggtgtggctgggagagctgcagagatcg
atgtacgcgtgggagatctcggaccagctgctgcagctcaaacaggatgtggagtcgtgt
tacttcgccgctcagacgatgaagatgaagatccagacctcgttcttcgagctgccgcca
gaaacccacacggccctccgagactccctgctgacccacatccagaacctcaaagacctg
tcccccatcatcgtcacccagctggcgttggcgatcgctgacctcgccctgcagatggcc
tcgtggaaaggatgcgttcacacgctcatagaaaagtacaacagtgacatcagctccatg
cccttcctgatagagatcctcaccgtgctgccggaggaagttcacagccgctcactgagg
atcggagccaatcggaggacggagatcatcgaggacttagcgtattattcaagcactgtg
gtgaccctgctgttacagacgtcgtgcgtggagaagacggggaacgatgagaagatgctc
atcaaggtgttccgctgtctgggcagctggttcaacctgggggtcctggacagcaacttc
atggccagcaaccagctgctcatggtcctgttccaagtcctgcagagagacgaaacctcc
accaacctccacgaggcggcgtcggactgcgtgtgctcctcgctgtacgccatcgagaac
gtggagaccaacgtggcgttggcgctgcagctgttccagggcgtgctgacgctggagacc
gcctaccacatggccgtggcccgggaggacctcgacaaagtgctgaactactgcaggatc
ttcaccgagctctgtgagaccttcctggagaccaccgtcaggagtccggggcagggcatg
ggggacctgaggaccctggagctgctgctgatctgtgcaggacaccctcagtacgaggtt
gtggagatctcctttaacttctggtaccgtctgggagaacacttgtataagatcaacgac
gccgcgctgcacagcatcttcagaccctacatccagagactcctgcactgcctggcccgg
cactgtcagctggacccagaccacgaagggatcccagaagacacggacgacttcggggag
ttcaggatgagagtgtccgacctcgttaaagacgtcattttcctggttggttctatggag
tgtttctctcagttatattctacattaaaagaagggaaccccccctgggaggtgacagaa
gccgttctcttcatcatggccgccatcgccaaaagtgtcgacccagagaacaaccccacc
ctgtcggaggtgctgcagcaggtggtgttgctccccgagagcgtccacatggcggttcga
tacacgagcatcgagctggtcggagagatgagcgaggtggtcgacaggaacccccgattc
ctcgacccggtgctgaactacctgatgaagggtttgagggagaagcctctggcgtcggcg
gcagcgaaggcgatccacaacatctgctcggtgtgcagagatcacatggctcaacacttc
cagggtctgctggacatcgctcgcgccctcgacaccttcgccctgtccaccgaggccgcc
gtcggactgctcaaaggtacggctctggttctcggtcgtcttcctctggagaagatcgcc
gagtgtctcagcgatctctgtgcggtccaggtcctggccctgaagaaggtcagtcttctg
tctgcagactctacaaacggtaaatcagctgatccgactgtgtggctcgaccggctcgcc
gtcatcttcagacacacaaaccccatcgtagagaacggccagacacacccctgtcagaaa
gtcatccaggagatctggccggtgctgtcggagactctgaacactcatcaggctgataac
aggatcgtggagcgatgctgtcgctgtctcaggttcgctgtacgatgtgttgggaaaggc
tccgcgtcactgctgcagccactggtcactcagatggtgggtgtgtaccaggtgtatcca
cactcctgcttcctgtacctgggcagtatcctggtggacgagtacggcatggaggagggc
tgtaggcagggtctgctggacatgctgcaggccttgtgcatgccgaccttccagctgttg
gagcagcccaacgggttgaggaatcatcccgacactgtggacgacctgttcagactggcc
accaggtttgtgcagcgtagccccgtcacgttgctaagcagcagcatcatcgttcacatc
atccagtgcgccatcgctgcgacctcattggaccaccgagacgccaactgcagcgtgatg
aagtttgtgcgtgacctgatccacaccggcgtggccaacgaccacgaggaggacttcgag
gtgaggaagcagctgattggccaggccatggagcagcacggccagcagctcatcacccag
ctgatgcactcctgctgcttctgcctgccgccgtacacgctgcccgacgtggccgaggtg
ctctgggaggtcatgatgttcgaccggccgacgttttgccgctggttagaaagcgctctg
aaaggtttaccgaaggaaacgtcaggaggagcggtgacggtgactcacaaacagctgaca
gacttccacaaacaggtcacgagcgctgaggagtgtaaacaggtgtgctgggccatcaga
gagttcaccagactgttccgatag
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