Scomber japonicus (chub mackerel): 128385121
Help
Entry
128385121 CDS
T09718
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128385121 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128385121 (nup107)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128385121 (nup107)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128385121 (nup107)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128385121 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF4485
TetR_C_31
Motif
Other DBs
NCBI-GeneID:
128385121
NCBI-ProteinID:
XP_053199953
LinkDB
All DBs
Position
23:22678698..22699160
Genome browser
AA seq
912 aa
AA seq
DB search
MEWGQSDLLSPVVRDDEVTIAARRRRKSAVAFPSLGSGSPVVSAVTPARPMMRNTPASLF
RQAVTPRVPDVSSILAPGGRTPRYTHTPRNAASSLNLDDSDWTMTSNIMYTSPVLPMENT
SFFTDDIANLSSALLKEDDPGEAAAASLFPEFLGSFLKHSSSAVFELLEDYQTLCQEKVN
MLQHVVLRAGQNSKTAGVCWLLQQENCSWRLITSLYRDRVQLALEDDIMTDIAIPSESEK
IVVEQLFQRDAIIRQSQLVVDWLESIARDQVGVFSDNIEYYAKNVCWENTLHALKLRRKS
SAGFSVPLVTELDPDAPLRQQRPLADLDREDDARLLKNLFTLIRAGMTEEAQRLCKRCGQ
AWRAATLEGWKLYHDPNMTSGSRELQPVEGNPHRGIWKACCWRMAEEEQLNRYERAIYAG
LSGNLKPLLAVCESWEDCVWAHFRVMVDSLVEKDLMSSGMAHQEVETLPREYLEANWTME
KVFEELQASESKRVLEETREHYHVIQKFVILGDLDGLLEEFSDWLAASKPLPSHLLRFMS
HLLLFFRSLGLALKEEVCVDVLKAYVSLLIRDQQTDLVASYVSQLPAELATAQYATFLET
VNQPELRPRCLQLATDAGLDVAAITKLVVETVRERDDTEFTHHSQTLETGTTKEDQRKID
IIDWLLFDPAHRAEALKQSNAIMRKFLALQKHDAAKAVFSKVPEDSMKEIYCQWAGVGQT
APPPAEDENSIREHLCIRAYLEAHEAFTDWFSHSSSAPQKPAPAPEAKFTERVANEMREK
EYQISLSSWTCRLDVLTEDVKERIYNVLLFVDGGWMVDNRQDTEQDSERSHQMAALRSLC
LPRLSFLLLSVLQNSSRHQEALRLADIISSDQHRLYQVFSKEELRRFLQKLRESSLALLD
RGLDPLGYELQP
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggagtggggtcagagtgatctgctgtctccggtggttcgagatgacgaggtgacgatc
gctgcccgcaggaggaggaagagcgccgtcgccttcccgtccctcggcagcggcagcccc
gtcgtctccgcggtaacgccggctcgccccatgatgaggaacactcctgcctcattgttc
agacaggctgtgactccgagggttccagatgtttcctccattttggctccaggaggtcga
acgcctcgatacacacacacaccgagaaacgccgccagcagtctgaatttggacgacagc
gattggacgatgacgtcgaacatcatgtacacctctcccgttttgccgatggagaacacg
agcttcttcacggacgacatcgccaacctgagctcggcgctgctgaaggaggacgacccg
ggagaggccgcggccgccagtctcttcccagagttcctcgggtcttttctgaaacactcg
tcctctgcggtgttcgagctgctggaggattatcagacgctctgccaggagaaggtgaac
atgctgcagcacgtcgtcctcagagccggtcagaacagtaagacagcaggagtctgctgg
ctgctgcagcaagaaaactgctcctggagactcatcacctccctctacagggatcgggtc
cagttggcgcttgaagatgacatcatgacagacatagctattcccagtgagagtgagaag
atcgtggtggagcagctttttcagcgggacgctataatacgacagagtcagctggttgtt
gattggctggagagcatcgccagggaccaagtcggagtgttttctgacaacattgaatac
tacgccaaaaacgtctgctgggagaacacccttcatgcgctgaagctgaggaggaagagc
agcgctggcttctctgtccctctggtcactgagctggacccggacgctcctctccggcag
cagcgccccctggctgacctggacagagaggacgacgcccgactgctgaagaatctgttc
acactgatcagagcggggatgaccgaggaggctcagaggctgtgtaaacgctgcggtcag
gcctggagagcagcgactctggaaggctggaaactctaccacgaccccaacatgacctca
ggcagcagagagttgcagccggttgaaggaaatcctcacagaggaatctggaaggcgtgc
tgctggaggatggccgaggaggagcagttgaacagatacgagagagcgatctacgccggc
ctgagtggaaacctcaaaccgctgctggcagtgtgtgagtcttgggaggactgtgtgtgg
gcgcacttcagagtgatggtggactcgctggttgaaaaggatctgatgtcgtcgggtatg
gcccaccaggaagtggagacactaccaagagaatacctggaggccaactggacgatggaa
aaggtgtttgaggaacttcaagcttcagagtcaaagagggtgttggaggagacgagagag
cattaccacgtcatccagaagttcgtcatcctgggagacttggacggtctgctggaggag
ttttctgattggctggcggcctctaagccccttccctcccacctgctgcgattcatgagt
cacctcctgctgtttttccgctctctgggtttggctctgaaggaggaggtgtgtgtggac
gtgctgaaggcgtacgtctccctcctgattcgggatcagcagactgacctcgtggcgagc
tacgtcagccagctcccggccgagcttgccaccgctcagtacgccactttcttagagacc
gtcaaccagccggagctccgcccacgctgcctgcagctcgccaccgacgccggtctggat
gtcgctgcgataacgaagctggtggtggagacggtgagggagagagatgacaccgagttt
acacatcacagccagacactggagacgggaactacaaaggaggaccaaaggaagattgat
atcatcgactggctgctgtttgacccggcccatcgagccgaggccctgaagcagtccaac
gccatcatgaggaagttcctggctctgcagaaacacgacgcagccaaggcggtgttctct
aaagtccctgaggactcgatgaaggagatttactgccagtgggccggagtcggacagacc
gcgcccccgccggctgaggacgagaactccatcagagaacacctgtgtatcagagcttac
ctggaagcccacgaggcgttcactgactggttcagccacagcagctctgccccccagaag
ccagcgccggcccccgaggccaaattcacagagagggttgccaatgagatgagggaaaag
gagtatcagatctccctgtcatcctggacttgtcgcctggacgttctcactgaagacgtg
aaagagagaatctacaacgtgctgctgttcgtagacggaggatggatggtcgacaacaga
caggacacggagcaggattcagagcgcagccaccagatggcggcgttgcgttctctgtgt
ctgcctcgcctcagcttcctgctgctcagcgtgctgcagaactcctccagacaccaggag
gcgctgcggcttgccgacatcatctcgtccgaccagcaccgcctctaccaggttttctct
aaagaggagctcagaaggttccttcagaagttgagggagtcatcgctcgctctgttggac
cgaggactcgacccgctgggctacgagttacagccatga
DBGET
integrated database retrieval system
