Scomber japonicus (chub mackerel): 128385188
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Entry
128385188 CDS
T09718
Symbol
usp6nl
Name
(RefSeq) LOW QUALITY PROTEIN: USP6 N-terminal-like protein
KO
K20133
USP6 N-terminal-like protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128385188 (usp6nl)
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128385188 (usp6nl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
128385188
NCBI-ProteinID:
XP_053200024
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All DBs
Position
23:21668514..21738009
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AA seq
921 aa
AA seq
DB search
MQVLQIVKELVSPSRRRAAARFGASDTEQDAAVKLEQERAEIVAKYDKGKEATVEPWXDT
NFHLYKVIDRFGFVHESELPSHFSLLTQQKHTEVERTSKWLKMLKSWDKYKNSEKLVRRV
YKGIPLQLRGEVWCLLLDIPKIKEEKKDFYEKLKARARGVSPDIRQIDLDVNRTYRDHIM
FMHRYDVKQQALFHVLTAYSMYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLSGQK
HAMHGFFVPGFPKLMRFQEHHDRILKKMMPKLKQHLDSQEVFTSLYTMKWFFQCFLDRTP
FTLTLRIWDIYILEGERLLPSMSYTLLKLHKKHLLKLSMEELVEFLQVTLSKDFFFEDDF
VVEQLQASMTELRKAKLDLPAPGEDAEFPKKPLGQLPPELASVVNHVGNGQSHAEPAEPP
RGPSPVPERHRSDSRPPSRSRRDSLDKPFRHHKDRRDVRSRGSGEIPNDHQRQSTSTTPE
RGSTPSSATTPIPQLTPVDRGKFQSHATANHNSNAASSSSKEITPRWFKPSETKLEAVKA
AAARETHLSRGASPAPSSPGDTAMPHRRPRSKGFVPGSNRGSNASQYDNVPGVPEQDFEI
LELERPPSRMRTPRSETPFSVSSLHQGSPNRGPSLGGSVVSVASGHRMAKHGLPPFSHNK
PAGVQAGYHGSHNQYHTPPQQHSPGRTTTEVPIFHPAYSVSLDPRGDDRHYAPPSQFSSP
SNMGYREHAYATTQRHPNSLSPEKALMNNSFATYRRQPPPSSSTHNLRNARPPPGEHSLQ
QLDTQGRSTPIYLQQLTSATQVYNAPDYRFEGLRRGDQNMQYLQQEAGGQRRAVDGIAWP
PEDELLPQSPGGMPRSPSFQRAQMSPVQEFTFPPDPNNLLHYRTQLQEQQPVIRQQLPQL
FGGPHYRHAQEAFALQESMLL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcctacagatcgtcaaggagctggtgtctccgtccagacgcagggcagccgcc
agattcggagcgtctgataccgagcaggatgcagcggtgaaacttgaacaggagcgagct
gagatagtcgccaaatatgacaagggaaaagaggccaccgtggagccgtggnaggacacc
aacttccacctgtacaaagtcattgaccgcttcggcttcgtccatgagagtgaacttccg
agtcacttctcacttctcacgcagcaaaaacacacggaggtggagcggacttccaaatgg
ctgaagatgctgaagagctgggacaaatacaagaacagcgaaaagctggtcaggagggtc
tacaagggaattcccctgcagctccgaggagaggtgtggtgtctgctgctcgatattccc
aaaataaaggaggagaagaaagacttttatgagaagttaaaggctcgagctcgaggagtc
tctccagacatccgtcagatcgacctggacgtgaaccgaacctacagagatcatatcatg
ttcatgcatcgctacgacgtcaagcagcaggcgctcttccacgtcctcacagcctactcc
atgtacaacactgaggtgggatactgtcagggtatgagtcagatcactgcgctgcttctc
atctacatgaacgaggaagacgctttctgggctttggtcaaactgctgtctgggcagaaa
cacgcgatgcacgggttttttgttcccggcttcccgaagctgatgcgtttccaggagcat
cacgaccgcatcctgaagaagatgatgcctaaactcaaacaacacctggacagccaagag
gttttcaccagcctctacaccatgaagtggttcttccagtgtttcctggatagaactccg
ttcactctcactctcaggatctgggacatttacatcttagagggtgaaagactgctgcct
tccatgtcctacactctcctcaagctgcacaagaagcacctgctgaagttgtccatggag
gagctggtggagttcctgcaggtgactctgtccaaagatttcttcttcgaggacgacttc
gtggtggagcagctgcaggcgtccatgacggagctcaggaaggccaagctggatctgccg
gctccaggtgaagacgcagagttccccaagaagcctctagggcagcttcctcctgagctg
gcgtcagtggtgaaccacgtgggtaacgggcagagtcacgccgaaccagccgaacctccc
agggggccaagtcctgtaccggaacgccatcggtcggacagtcgccccccgagcaggtca
cgccgggactcgctggataaaccgttccgccaccacaaagacaggagggatgttcgctcc
aggggatcgggtgagatccccaatgatcatcaaaggcagtctacgtccaccacgcctgag
agggggtcgactccatcctcagccaccacccctataccccagctgaccccggtagataga
gggaagtttcagagccacgccaccgccaaccacaactccaacgcggcctccagctctagc
aaagagatcactccccgctggttcaaaccctccgagaccaagctggaagctgtgaaagcg
gcggcggcccgcgagacgcacctgagccgaggggcgtcgccggccccctccagtccaggt
gacaccgcgatgcctcaccgccggccacgctccaagggcttcgtccccggctccaaccgt
ggctccaacgcctcccagtatgacaatgtgccgggagtgccagagcaggattttgagatc
cttgagcttgaaagacctccgtccagaatgaggacccctcgcagtgaaacccccttcagc
gtatcatccctccatcagggcagcccgaaccgtggacctagcttgggtggaagcgtcgtc
tccgtcgcatcagggcacaggatggccaaacacggccttcctccgttttcccacaacaag
ccagcaggtgtccaggctggttaccatggcagccacaaccagtaccatacccctccgcag
cagcactcccccggtaggacgactaccgaggtccccatcttccatccggcgtacagcgtg
agcctggaccccagaggcgacgacagacactatgctccgccctcccaattttcgtcgccc
tccaacatggggtacagggaacacgcgtacgccaccacccagcggcaccccaacagcctc
tcccccgagaaggcgctcatgaacaactccttcgccacctaccgcaggcagccgccaccc
agctcctccacccacaacctccgaaacgccaggcctcccccgggggagcactccctgcag
cagctcgatacccaggggaggtccaccccgatctacctgcaacagctcacctccgccacg
caggtgtacaacgccccagactataggttcgaggggcttcggagaggcgatcagaacatg
cagtacctccagcaggaagcaggggggcaacggcgagctgtagacgggatcgcgtggccg
ccggaagatgagctactccctcaatccccaggtgggatgccccgctcgcccagcttccag
cgagcccaaatgtcccccgtgcaggagttcacgttccccccggaccccaacaacctgctc
cactacaggacacagttacaggagcagcagcccgtcataaggcaacagctcccccagctg
ttcggcggaccacactacaggcacgcacaggaggcgtttgccctgcaggagtccatgctg
ctgtga
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