Scomber japonicus (chub mackerel): 128385351
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Entry
128385351 CDS
T09718
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1 isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128385351 (fbxo18)
Enzymes [BR:
sjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128385351 (fbxo18)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128385351 (fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
Viral_helicase1
F-box
UvrD_C_2
AAA_19
F-box-like
AAA_30
PhoH
AAA_22
ResIII
AAA_11
Motif
Other DBs
NCBI-GeneID:
128385351
NCBI-ProteinID:
XP_053200189
LinkDB
All DBs
Position
23:complement(7922118..7938091)
Genome browser
AA seq
1059 aa
AA seq
DB search
MEVAAKGKAKRRHLNAEECDELRRQAEGTCALTLPQTINQGHGSRNPNQGLYPRTPTKRR
KCAASASGSPAGKQKGIHDFFSVTGVIRTSPQKSAQPCSSTCTNGLNGEVFPRGKSNAAE
EEEDDDDTDDDVSLLAAVMPPDPEEEEEEEEEEEEEEEIDDFTLLAAEKMLRQTETDKKE
VDYLEGMTAEMFGHDDEFDNQEEVEPLPDEHFGLLGSSRVLLQPQGCIDDLPEEVLRQVL
CLLPARDLYLNVSRVCHRWSNIVKDTKFVPFKKQYHRFMMREKYTVLEVFSSLTSSGITD
PALSQQAIRNFVVVMAQHKVGERVRPDDVLECVKKHRLYPQAEASIRLRIPKVPECINLS
VEGPNPYAAMAVILILCESVGDVQALVSLLSGCMSYTAITEYLSHVAMMLLAMKRGKVQI
SERLHYNIYYVLHLMENGPFPVSSEGSRTQIQLTQEQQQILCHDIEEDHVVKVMAFAGTG
KTTMLVKYAEQRPHLRFLYVAFNKSVAVEAQRRFPRNVHCKTVHSLAFKDVGRRYQSLGK
LTPNLKPFAINSVLPKGRGGFKKAKVVATTLNTFMASADDTISISHVPTKDVIEYEKPYF
VRDAENIWSKMKELVKTDNDAFYLTHDGYLKLWQLQKPRLSDQFDVLFIDEAQDCTPAIM
DVMLSQRCGKILVGDPHQQIYTFKGAVNALHIVDHTHIYYLTQSFRFGAEIAFVGATILK
VCKNVQKILVGGKQKGSVSDETADQVKTALRAGVSRRPGKTAVLSRTNASMFTEAVELTD
VNPNCRIHYVGGVKGIGLDRILDIWKLMQGAHYQIRSIKDPLIRSFAKKKEHRFEALKTY
AEQTEDHELEGKLLTVERYRGRIPHLVTCLEKCFENDMYKADFILGTVHKAKGLEFDTVM
VSDDFAKIPSPKHELHHHPAFAFDKFEDDEWNLLYVAVTRARSSLIITKNIHHILTVAGE
YFLKSEMPSTLVKVDTPLPCSIGNCPNCITPGSSFIMCRKKLKYTDGESASGPLCERCVW
TRIGPMAFLMTDDVLSMAAIPERFEMPLGPHHVMLLGLL
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggctgctaaagggaaggccaagaggaggcatctgaacgcagaggagtgtgat
gaactgagacgacaggcagagggaacatgcgccctcaccctgccccaaaccatcaaccag
gggcatggcagtcgtaacccaaaccaggggctttaccccaggactcccaccaagagacgg
aagtgtgcagcatctgcctcaggaagtcctgcagggaagcagaagggcatccatgacttc
ttttcagtgactggagtcatccgtactagcccgcaaaaatccgctcagccctgctcctca
acctgcactaatggactcaatggagaagtttttcccagaggaaaatcaaatgctgcggaa
gaggaggaggatgatgacgataccgatgatgatgtcagcctgttagctgctgtgatgcct
cccgaccctgaggaggaggaggaggaggaggaggaggaggaggaagaagaagagattgat
gatttcactttgttagctgctgaaaaaatgctgagacagactgagacagataagaaggag
gtggactatttggaggggatgacggcagagatgttcgggcacgatgacgaatttgacaat
caagaggaagttgagcccctccctgatgagcactttgggctcctgggcagcagcagagtt
ttgctgcagccacagggctgcattgatgaccttccagaggaggtgctgaggcaggtactg
tgcctcttgcctgccagggacctctaccttaacgtcagccgcgtctgccatcgctggagt
aacatcgtcaaggataccaagttcgtgcccttcaagaaacaataccatcgcttcatgatg
agggagaagtacacagtgctggaggtcttctcctccctgacgagcagcggcataacagac
ccagcactttcccagcaggccatacgaaattttgttgtcgtaatggcccagcataaggtg
ggtgagcgtgtgaggccagatgacgtcctggagtgtgttaagaaacatcgcctttaccct
caggcagaagcctccatcagattacgaattccgaaggtcccagagtgcataaacctaagt
gttgagggtcccaacccgtacgcggccatggctgtcatactgatcctatgcgagagtgtg
ggtgacgtacaggccttggtgtctctgctctccggctgtatgtcgtacacggccatcaca
gaatacctcagccacgtggccatgatgttgctcgcgatgaagaggggcaaggttcagatc
agtgagaggttgcattacaacatctactatgtgcttcatttgatggagaacgggcccttt
cctgtcagctccgagggcagccgaactcagattcagctcacccaggagcagcagcagatc
ctctgtcacgacatcgaggaggaccatgtggtcaaagtcatggcttttgcaggtacgggc
aagacgaccatgttggtgaagtacgcagagcagcggccgcacctccgcttcctctacgtg
gccttcaacaagtcagtggccgtcgaggcgcagcgccgcttcccccgcaacgtgcactgc
aagacggtccactccttggccttcaaagacgtcggaaggaggtatcaatcgcttgggaag
ctgacccctaacttgaagccattcgccatcaactctgtcctacctaaaggccgcggcggc
ttcaagaaggctaaagtcgtagccacaaccctcaacaccttcatggcttcagcagacgat
accatcagcattagtcacgtccccaccaaagacgtcattgaatatgaaaaaccgtatttt
gtccgtgacgcagagaacatctggagcaaaatgaaggaactagtcaagacagacaacgac
gccttctacttgacccacgatggttaccttaagttatggcagctccaaaagccccgccta
tcagaccaattcgatgtccttttcatcgacgaggctcaagactgtactccagccattatg
gacgtcatgctgtctcagcgatgtgggaaaatcctggtcggagatccccaccagcagatc
tacaccttcaaaggagccgtcaacgccttgcacatcgtcgaccacacgcacatctactac
ctcacacagagcttccggttcggtgccgagatcgcctttgtcggtgccaccatcctcaaa
gtgtgcaagaatgttcaaaagattctagtaggagggaaacagaaaggcagtgtgtctgat
gagactgcagaccaggttaaaacagctttgagggcgggtgtgagtcgtcgcccggggaag
acggccgtcttatcgaggaccaacgccagcatgttcactgaagcagttgagctgaccgat
gtcaacccaaactgccgcatccactacgtaggaggtgtcaaaggtattggccttgacagg
atcctggacatttggaagctgatgcaaggagcacactatcaaataagatccatcaaggat
ccacttatccgctccttcgcaaaaaaaaaagagcatcgcttcgaggccctgaagacgtac
gcagagcagacagaggatcacgagctggagggcaaactcctcaccgtggaaagatacaga
ggtcgcatcccacacctggtgacgtgcctggaaaaatgcttcgaaaatgacatgtacaaa
gcagacttcatcctgggaacggttcacaaggcaaaaggtcttgagttcgacactgtgatg
gtctccgatgactttgccaagatcccgtcccccaagcatgagctgcaccaccatcccgcc
ttcgcattcgataaatttgaagacgatgagtggaacttactgtacgtggcagtaactcgt
gccaggagctcgctcatcatcaccaagaacatccaccatattctcacagtagctggggaa
tacttcctgaagtcagagatgcccagcaccctggtgaaggtggacacgcctctcccatgc
tccatcggaaactgtcccaactgcatcacaccaggctcgtctttcatcatgtgcaggaaa
aagctgaaatatactgatggtgagtctgctagcggcccgctgtgcgagaggtgtgtgtgg
acacgcatcggaccaatggccttcctcatgacagacgacgtgctatcgatggcagcaata
ccagaacgatttgagatgccgcttgggccacaccacgtgatgctcctgggactcctctga
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