Sphingobium indicum UT26S: SJA_C1-02860
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Entry
SJA_C1-02860 CDS
T01201
Symbol
hlyD
Name
(GenBank) HlyD-family secretion protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp01501
beta-Lactam resistance
sjp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SJA_C1-02860 (hlyD)
01503 Cationic antimicrobial peptide (CAMP) resistance
SJA_C1-02860 (hlyD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjp03036
]
SJA_C1-02860 (hlyD)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjp02000
]
SJA_C1-02860 (hlyD)
01504 Antimicrobial resistance genes [BR:
sjp01504
]
SJA_C1-02860 (hlyD)
Chromosome and associated proteins [BR:
sjp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SJA_C1-02860 (hlyD)
Transporters [BR:
sjp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SJA_C1-02860 (hlyD)
Antimicrobial resistance genes [BR:
sjp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SJA_C1-02860 (hlyD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
RND-MFP_C
BSH_CzcB
Beta-barrel_RND_2
BSH_CusB
Biotin_lipoyl
CzcB_C
HH_EMRA
HH_MFP_RND
BSH_RND
BSH_Fcp1
BSH_YknX
HH_AprE
Peptidase_M23
Beta-barrel_AAEA
HH_YBHG
RnfC_N
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
BAI95120
UniProt:
D4YXN8
LinkDB
All DBs
Position
1:300336..301508
Genome browser
AA seq
390 aa
AA seq
DB search
MNYETSLVGDAPANVLGEQEERSVWRRRLTIGAVVAIVLIAVATWVGMRGNGADAPANAA
QAPVVTVISPGRSTVSNTVSATGSLAARVEMPVGVVGEGGAVTRVLVQPGDWVRAGQVLA
TVERSVQTEQIRSLAAQVEVARADAKLAQAQLDRAKSLVSRGFISQADIDQRTATRDAAN
ARVNVAAAQLAEQRARTGRLDIRAPAAGLVLTRAVEPGQIVSAGSAVLFRMAKGGEMEML
AQVSEGDLAAIRPGNSATVTPVGGTAQFAGRIWQVSPVVDNQTRQGIARIAIPYDPAIRP
GGFASAAIVSGSGSAPMLPESAVQSDEKGNFVYVVNGRNEVQRRDVKIGQVTDAGVSILN
GLNGDERIVASAGAFLTPGQKVKPEAGKSK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgaaacttcgttggtcggcgatgctccggcaaatgtccttggcgagcaggag
gagcgctccgtctggcgccgccggctgacgatcggcgccgtggtcgcgatcgtgctgatc
gccgtcgccacctgggtcgggatgcgcggcaacggcgccgacgcgcccgccaatgcggcg
caggcgccggtcgtgacggtgatcagccccggccggtcgaccgtgtcgaacaccgtcagc
gccaccgggtcgctcgcggcgcgggtggagatgccggtgggcgtggtcggcgaaggcggc
gcggtgacgcgggtgctggtgcagccgggcgactgggtgcgcgccgggcaggtgctggcg
accgtcgagcgttccgtccagaccgagcagatccgctccctcgccgcgcaggtggaggtc
gcgcgcgccgacgccaagctggcgcaggcccagctcgaccgcgccaagtcgctggtctcg
cgcggcttcatcagccaggccgacatcgaccagcgcaccgccacccgcgacgcggccaat
gcgcgcgtgaacgtggccgccgcgcaactggccgagcagcgcgcccgcaccggccggctc
gacatccgcgcccctgccgccgggctggtgctgacccgcgccgtggaacccggccagatc
gtgagcgcgggcagcgccgtgctgttccgcatggccaagggcggggagatggagatgctg
gcccaggtcagcgagggcgacctggccgcgatccgtccgggcaacagcgccaccgtgacc
ccggtcggcggcacggcgcaatttgccggacgcatctggcaggtgtcgccggtggtcgac
aaccagacccgccagggcatagcccgcatcgctatcccctatgatcccgcgatccgtccg
ggcggcttcgcctccgccgcgatcgtcagcggcagcggctccgcgccgatgctgccggaa
tcggcggtgcagagcgacgagaagggcaatttcgtctatgtcgtcaacggccggaacgaa
gtgcagcggcgcgacgtcaagatcggccaggtgaccgatgcgggcgtgtcgatcctgaac
ggcctcaacggcgatgaacgcatcgtggcttcggccggcgccttcctgacgccggggcag
aaggtgaagccggaagccggcaagtcgaaatga
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