KEGG   Sphingobium indicum UT26S: SJA_C1-19540
Entry
SJA_C1-19540      CDS       T01201                                 
Name
(GenBank) putative endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
sjp  Sphingobium indicum UT26S
Pathway
sjp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sjp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SJA_C1-19540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sjp03400]
    SJA_C1-19540
Enzymes [BR:sjp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SJA_C1-19540
DNA repair and recombination proteins [BR:sjp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SJA_C1-19540
 Prokaryotic type
     SJA_C1-19540
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5
Other DBs
NCBI-ProteinID: BAI96788
UniProt: D4Z2F6
LinkDB
Position
1:1962754..1963404
AA seq 216 aa
MNKDRIFDFFSRLAEANPAPRTELEYDNDYQLLVAVVLSAQATDVGVNKATRALFREVRT
PQQMVDLGEEGLKAHIKTIGLFNAKAKNVIALSEILVRDFGGEVPQDRDILTTLPGVGRK
TANVVMNTAFGQETFAVDTHIFRVGNRTGLAPGKTPLAVELKLEKRVPGPFRRDAHHWLI
LHGRYVCKARKPECWRCIVADLCRFKPKTPAPGAKP
NT seq 651 nt   +upstreamnt  +downstreamnt
gtgaacaaggacaggatattcgactttttcagccgccttgcggaggccaatccggcccct
cgcacggaactggaatatgacaatgactatcagcttctggtggcggtggtcctgtcggct
caggccacggacgtcggcgtcaacaaggcgacccgcgccctgtttcgggaggtccgcacc
ccgcaacagatggtcgacctaggggaagagggcctgaaagcccatatcaagacgatcggc
ctgttcaacgccaaggccaagaacgtcatcgccctgtcggaaatattggtccgcgatttc
ggcggagaagtgccgcaggaccgcgacatcctcaccaccctgcccggcgtcgggcgcaag
accgccaatgtcgtcatgaacaccgccttcgggcaggagacgttcgcggtcgacacccat
atcttccgcgtcggcaaccgcaccggcctggcgcccggaaagacgccgctggcggtcgaa
ctgaagctggaaaagcgcgtccccggccccttccgccgcgatgcgcaccactggctgatc
ctgcatggccgctatgtctgcaaggcgcgcaagcccgaatgctggcgctgcatcgtcgcc
gacctctgccgcttcaagcccaagacgcccgcgcccggcgccaagccctga

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