Sanguibacter keddieii: Sked_09540
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Entry
Sked_09540 CDS
T01214
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
ske
Sanguibacter keddieii
Pathway
ske00020
Citrate cycle (TCA cycle)
ske00630
Glyoxylate and dicarboxylate metabolism
ske00785
Lipoic acid metabolism
ske01100
Metabolic pathways
ske01110
Biosynthesis of secondary metabolites
ske01120
Microbial metabolism in diverse environments
ske01200
Carbon metabolism
ske01210
2-Oxocarboxylic acid metabolism
Module
ske_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ske_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sked_09540
00630 Glyoxylate and dicarboxylate metabolism
Sked_09540
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Sked_09540
Enzymes [BR:
ske01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Sked_09540
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
Sked_09540
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
Sked_09540
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
Sked_09540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ACZ20904
UniProt:
D1BCQ6
LinkDB
All DBs
Position
complement(1099972..1103823)
Genome browser
AA seq
1283 aa
AA seq
DB search
MSAIFGANEWLVDELYEQFLADKNAVDPAWWEFFESYTPGETSPDTSSLSTPEAAATSKP
AAPSGPAAQAKDASTAAASAPEPESASPAPAEKASAAAAAPRAHGEQAARQAQKVQKAAE
SQEAAVHADSPTQPPVATAQPATAPYAEVAKARTSPSSPSGEDDVQKLRGPAARVVSNME
ASLTVPTATSVRAIPAKLMVDNRIVINNHLVRGRGGKVSFTHLIGFALVEALKEMPSMNA
AYALVDGKPSVIRPAHVNFGLAIDLPKPDGTRQLLVPSIKAAETMDFAQFWAAYEDIVRR
ARNNKLTVEDHQGATISLTNPGTIGTVHSVPRLVTGQGAIIGVGAMDYPAEFAGASLEQL
SKMAISKVLTITSTYDHRIIQGAASGDFLRILGIKLLGEDGFYDRVFTSLRVPYEPVRWV
RDNTVDADAEAAKPARIAELIHSYRSRGHLMADTDPLAYRQRKHPDLDVQTHGLTLWDLD
RVFPVNGFGPKPKATLRDVLGLLRDSYCRTIGAEYMHLADRTQRKWLQERLEAGYERTPR
EEQLRILRRLNSAEAFETFLQTKFVGQKRFSLEGGESVIALLDGVLSGAADAGLDEVCIG
MAHRGRLNVLANIAGKSYAQIFSEFEGNQDPRTVQGSGDVKYHLGTEGTFTSESGATTKV
YLAANPSHLEAVDPVLEGIVRAKQDRIDLGGDGFSVLPILIHGDAAFAGQGVVTEVLNLA
QLRGYRTGGTIHVVINNQVGFTTGPSSSRSTLYCTDVAKGLQVPIFHVNGDDPEAVVRVA
QLAFEFREQFDRDVIIDMVCYRRRGHNEGDDPSMTQPLMYNLIEAKRSVRKLYTENLVAR
GDISVEEAEQVLADYQAQLERVFTETREGGYTPPANSDPVAGLERPESQREDAGTMVGWK
TATDQAVLDRIGQAHATPPEGFTVHPKLAQLLEKRAAMSSEGGIDWGYGEILAFGSLLME
GTPIRLAGQDSRRGTFVQRHAVMHDRETGAEWTPLLYLSGDQAKLWVYDSSLSEFAALGF
EYGYSVERPDALVLWEAQFGDFVNGAQTIIDEFISSAEQKWGQNSSVVLLLPHGYEGQGP
DHSSARVERFLQLCAEDNLTVAFPSTPASYFHLLRRQAYDRPRRPLVVMTPKSMLRLKAA
ASPTEDFTSGTFREIIRDDLAEAQASKVDRVLLCSGKVYYDLIAHRVKSGDTSTAIVRLE
QLYPLEGEMLTEAVAAFGDAELVWVQDEPENQGAWPFIALNAPEALGREMRVVSRSASAS
PAAGSAKKHLAEQTDLVERAFAR
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccatcttcggagccaacgagtggctggtcgacgagctgtacgagcagttcctc
gccgacaagaacgcggtcgaccccgcgtggtgggagttcttcgagagctacacgccgggc
gagaccagccccgacacgtcgtcgctcagcacccccgaggcggcggcgacctcgaagccc
gcagcaccctcgggccccgcagcgcaggcgaaggacgcgagcaccgccgccgcgtccgcg
ccggagcccgagagcgcatccccggcacccgccgagaaggccagcgccgccgcagccgcg
ccgcgcgcccacggcgagcaggccgcccgccaggcgcagaaggtccagaaggccgccgag
tcccaggaagcagccgtgcacgccgactcccccacccagcccccggtcgccacagcccag
cctgcgaccgccccctacgccgaggtcgccaaggcgcgcacctccccctcgtccccgtcg
ggcgaggacgacgtgcagaagctccgcgggcccgccgcccgcgtggtctcgaacatggag
gccagcctcaccgtcccgaccgcgacgtcggtgcgcgccatcccggccaagctcatggtc
gacaaccgcatcgtcatcaacaaccacctcgtccgcggtcgcggcggcaaggtgtcgttc
acgcacctcatcggcttcgcgctcgtcgaggccctcaaggagatgccctcgatgaacgcg
gcctacgcgctcgtcgacggcaagccctcggtgatccggcccgcgcacgtgaacttcggc
ctcgcgatcgacctcccgaagcccgacggcacccgccagctcctcgtcccgagcatcaag
gccgccgagacgatggacttcgcgcagttctgggccgcctacgaggacatcgtccgccgc
gcccgcaacaacaagctcacggtcgaggaccaccagggcgccacgatctcgctcaccaac
cccggcaccatcggcaccgtgcactccgtgccgcgcctggtgaccggccagggcgcgatc
atcggcgtcggcgcgatggactacccggccgagttcgccggcgcctccctcgagcagctg
tccaagatggcgatctccaaggtcctcaccatcacctcgacctacgaccaccggatcatc
cagggcgccgcctctggcgacttcctgcggatcctgggcatcaagctgctcggcgaggac
gggttctacgaccgcgtcttcacctcgctgcgggtcccctacgagcccgtgcgctgggtg
cgcgacaacaccgtcgacgccgacgccgaggccgccaagcccgcgcgcatcgccgagctc
atccactcgtaccgctcgcgcggacacctcatggcggacaccgacccgctggcctaccgc
cagcgcaagcaccccgacctcgacgtccagacgcacggcctcacgctgtgggacctcgac
cgtgtcttccccgtcaacgggttcggccccaagcccaaggcgacgctccgcgacgtcctc
ggcctgctgcgcgactcgtactgccgcaccatcggcgcggagtacatgcacctggccgac
cgcacccagcgcaagtggctgcaggagcgcctcgaggccgggtacgagcgcacgcctcgc
gaggagcagctgcggatcctgcgcaggctcaactccgccgaggccttcgagaccttcctg
cagaccaagttcgtcggccagaagcgcttctcgctcgagggcggcgagtccgtcatcgcg
ctcctcgacggtgtgctctcgggcgcggccgacgccgggctcgacgaggtctgcatcggc
atggcgcaccgcgggcgcctcaacgtgctcgccaacatcgccggcaagagctacgcgcag
atcttctcggagttcgagggcaaccaggacccgcgcacggtccagggctccggagacgtc
aagtaccacctcggcaccgagggcaccttcacgtccgagtcgggcgcgaccaccaaggtg
tacctcgcggccaacccctcgcacctcgaggccgtcgaccccgtgctcgagggcatcgtc
cgcgccaagcaggaccggatcgacctcggcggcgacgggttctcggtgctgccgatcctc
atccacggcgacgcggccttcgccggccagggcgtcgtgaccgaggtcctcaacctcgcc
cagctgcgcggctaccgcaccggcgggacgatccacgtggtcatcaacaaccaggtgggc
ttcaccaccggcccgtcgtcctcgcgctcgaccctctactgcaccgacgtggccaagggc
ctccaggtgccgatcttccacgtgaacggcgacgaccccgaggccgtcgtccgcgtcgca
cagctcgccttcgagttccgcgagcagttcgaccgcgacgtcatcatcgacatggtctgc
taccgccgacgtggccacaacgagggcgacgacccctcgatgacccagccgctcatgtac
aacctcatcgaggccaagcgctcggtccgcaagctctacaccgagaacctcgtcgcccgc
ggcgacatcagcgtcgaggaggccgagcaggtcctcgccgactaccaggcacagctcgag
cgggtcttcaccgagacgcgcgagggtggctacaccccgccggccaactccgaccccgtg
gccggcctcgagcggcccgagtcgcagcgcgaggacgccggcaccatggtcggctggaag
accgcgacggaccaggcggtcctcgaccggatcggccaggcgcacgccacgccgcccgag
ggcttcaccgtgcaccccaagctcgcgcagctcctcgagaagcgtgcggcgatgtcttcc
gagggtggcatcgactggggctacggcgagatcctcgccttcggctcgctcctcatggag
ggcacgccgatccgtctcgccgggcaggactcgcgccgcggcaccttcgtgcagcgccac
gcggtcatgcacgaccgcgagaccggcgccgagtggactcccctgctctacctctcgggc
gaccaggcgaagctctgggtctacgactcctcgctcagcgagttcgccgccctcggcttc
gagtacggctactcggtcgagcgccccgacgcgctcgtgctgtgggaggcgcagttcggc
gacttcgtcaacggcgcccagacgatcatcgacgagttcatctcgtcggccgagcagaag
tggggccagaactcctcggtcgtgctgctgctgccgcacggctacgagggtcagggaccg
gaccactcctccgcccgcgtcgagcggttcctccagctgtgcgccgaggacaacctcacg
gtcgcgttcccgagcacgccggcgtcgtacttccacctgctgcgccgtcaggcctacgac
cgcccgcgccgtccgctcgtggtgatgaccccgaagtcgatgctccgcctcaaggctgct
gcgtccccgaccgaggacttcaccagcggcaccttccgcgagatcatccgcgacgacctc
gccgaggcccaggcctcgaaggtcgaccgcgtgctgctctgctcgggcaaggtctactac
gacctgatcgcccaccgcgtgaagagcggcgacacgtcgaccgcgatcgtccgcctcgag
cagctctacccgctcgagggcgagatgctcaccgaggccgtcgcggccttcggtgacgcc
gagctcgtgtgggtccaggacgagcccgagaaccagggtgcgtggccgttcatcgcgctc
aacgcccccgaggcgctcggccgcgagatgcgggtcgtctcgcgctccgcgtcggcctcg
ccggcggcgggctccgccaagaagcacctcgccgagcagacggacctcgtcgagcgggcc
ttcgcccgctga
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