Sanguibacter keddieii: Sked_11880
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Entry
Sked_11880 CDS
T01214
Name
(GenBank) transcriptional regulator
KO
K18909
MarR family transcriptional regulator, repressor for mepA
Organism
ske
Sanguibacter keddieii
Module
ske_M00705
Multidrug resistance, efflux pump MepA
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ske03000
]
Sked_11880
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
ske01504
]
Sked_11880
Transcription factors [BR:
ske03000
]
Prokaryotic type
Helix-turn-helix
MarR family
Sked_11880
Antimicrobial resistance genes [BR:
ske01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MepA [MD:
M00705
]
Sked_11880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MarR_2
MarR
HTH_27
HTH_IclR
PadR
TrmB
HTH_Crp_2
HTH_67
B-block_TFIIIC
Staph_reg_Sar_Rot
DUF7343
DUF5709
DprA_WH
F-93_WHD
LexA_DNA_bind
Penicillinase_R
HTH_24
DUF2250
GntR
DUF6293_C
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ACZ21131
UniProt:
D1BDR9
LinkDB
All DBs
Position
complement(1376599..1377042)
Genome browser
AA seq
147 aa
AA seq
DB search
MDHDDTTPPRSLELVRWIGWAQRKAGEDWIRERDLSHQQAFVLGHLARSPGAIQRELADL
SRTSAASVSSLLQGLERRGLVERRSEDGDERRKRVYATDAGIDLIAGFDSAMEAADETIL
APLDDDERAALQALLSKITAVLPPPSR
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atggaccacgacgacaccaccccaccccgcagcctcgagctcgtccgctggatcgggtgg
gcgcagcgcaaggccggcgaggactggatccgcgagcgcgacctcagccaccagcaggcc
ttcgtgctcgggcacctcgcacggtcacccggcgcgatccagcgcgagctggccgacctg
agccgcaccagtgcggcgagcgtctcgagcctgctccagggcctcgagcgccgcgggctc
gtcgagcgccgctccgaggacggcgacgagcgccgcaagcgcgtctacgcgaccgacgcc
ggtatcgacctcatcgcgggcttcgactctgcgatggaggccgccgacgagacgatcctc
gcccccctggacgacgacgagcgcgccgccctgcaagccctcctcagcaagatcaccgca
gtcctgcctcccccgtctcggtga
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integrated database retrieval system
