Shewanella khirikhana: STH12_00286
Help
Entry
STH12_00286 CDS
T06711
Symbol
cobQ
Name
(GenBank) Cobyric acid synthase
KO
K02232
adenosylcobyric acid synthase [EC:
6.3.5.10
]
Organism
skh
Shewanella khirikhana
Pathway
skh00860
Porphyrin metabolism
skh01100
Metabolic pathways
skh01240
Biosynthesis of cofactors
Module
skh_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
STH12_00286 (cobQ)
Enzymes [BR:
skh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.10 adenosylcobyric acid synthase (glutamine-hydrolysing)
STH12_00286 (cobQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATase_3
CbiA
AAA_26
MobB
ACT_7
GATase
Motif
Other DBs
NCBI-ProteinID:
AZQ09438
LinkDB
All DBs
Position
349777..351285
Genome browser
AA seq
502 aa
AA seq
DB search
MACATLMIQGTASDAGKTTLVAGLCRILAREGIKVAPFKPQNMALNSAVTQDGGEIGRAQ
ALQAIACGLEPHTDFNPILLKPASDSRAQVIVQGKALSHLEAAEFFGPAGKGYKAMAMEA
VLDSHQRLCGQYDCLLVEGAGSPAEINLRENDIANMGFAEAVDCPVILVADIDKGGVFAQ
LVGTLALLSESERVRVKGFVINRFRGDISLLQSGLDWLEAHTGKPVLGVVPYLHNLLLDA
EDALVPFTPEKREAQRLKVRVLVYPRTSNHTDFDPLRLHPGVDFDYLQIQSASPDALAGA
DLVILPGSKNVRADLECLKAQGFDKALKKHLRYGGKLLGICGGYQMLGLEIDDPLGVEEA
PGSSEGLEFLPLITELKPGKVLANVTGELTLGECHVALKGYEIHCGHTSVLGKLTRPLFL
TDDAGNPASDRGRISDDEAVFGTYLHGIFDTPEALSAVLAWAGYQGEEVAVSLDAHREQQ
LNRLADTLEQHLDMNRLKAIFL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcatgcgccacactcatgatccagggcacagcctcggatgccggcaagaccaccctg
gtggccggtctgtgccgaatactcgcccgcgagggcattaaggtcgcacccttcaagcca
cagaacatggcgctcaacagtgccgtcacccaggacggcggtgagattggccgcgcccag
gcgctgcaagctatcgcctgtggccttgagccacacacagacttcaatccgattctgctc
aaacccgcctccgacagccgcgcccaggtgatagtccagggcaaggccttatctcatctg
gaagccgccgagttttttggcccggctggcaagggttataaagccatggcgatggaggct
gtgctggactcccatcaacgattgtgcgggcaatatgattgccttttggtggaaggtgcc
ggcagtcctgccgagattaacctgcgtgaaaacgatatcgccaatatgggctttgccgag
gcggtggattgcccggtgatcctggtggccgatatcgacaaaggcggggtatttgctcag
ctggtgggcacgctggcgctcttgtccgagtcggagcgtgtgcgggttaaaggctttgtc
atcaaccgctttcgcggtgatatcagcctgcttcaatccgggctcgactggcttgaggcc
cataccggtaagcctgtgctgggtgtggtgccttatctgcataatttgctgctggatgcc
gaagatgcgctggtgccttttacgccggagaagcgcgaagcccagcgccttaaagtgcgg
gtgctggtgtacccaagaaccagtaatcacaccgactttgacccgctgcggctgcacccc
ggggtggatttcgattatctgcagatccagagcgccagcccggatgccttggcgggtgcc
gatctggtgatactgcccggcagcaaaaatgtgcgggcggatcttgaatgcctcaaggcg
caggggttcgataaggcgcttaaaaagcacttaaggtacggcggcaaactgctgggcatt
tgcggtggttatcagatgctggggctggaaatcgatgaccctctgggcgtagaggaggcc
cccggcagcagcgaggggctggagtttttgccgcttatcactgagcttaagcccggcaag
gtgctggccaatgtgaccggtgaactgactctgggcgagtgccatgtggcgctgaagggt
tatgaaattcactgcggccacaccagtgtgctcggcaagctgacccggccgctgtttttg
accgatgacgccggtaacccggcctcagacaggggccgcatcagcgacgatgaggcggtg
ttcggtacttacctgcacggtatttttgatactcccgaggcgctgagtgctgtgcttgcc
tgggcgggttatcagggcgaagaagtagcagtatctttggatgcgcaccgtgagcagcag
ctcaatcgcctcgccgataccctggagcagcatctggatatgaaccggcttaaggccatc
tttttataa
DBGET
integrated database retrieval system
