Shewanella khirikhana: STH12_01373
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Entry
STH12_01373 CDS
T06711
Symbol
yfbR
Name
(GenBank) 5'-deoxynucleotidase YfbR
KO
K08722
5'-deoxynucleotidase [EC:
3.1.3.89
]
Organism
skh
Shewanella khirikhana
Pathway
skh00230
Purine metabolism
skh00240
Pyrimidine metabolism
skh01100
Metabolic pathways
skh01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
STH12_01373 (yfbR)
00240 Pyrimidine metabolism
STH12_01373 (yfbR)
Enzymes [BR:
skh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.89 5'-deoxynucleotidase
STH12_01373 (yfbR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YfbR-like
HD_3
HD
Retrotrans_gag
Motif
Other DBs
NCBI-ProteinID:
AZQ10495
LinkDB
All DBs
Position
complement(1577232..1577819)
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AA seq
195 aa
AA seq
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MSHLFAHLARLKLIQRWPLMFNVRSENVQEHSLQVAMVAHGLAVIAKRQFGIEVDAYKAA
TLAIFHDASEVLTGDLPTPVKYFNKDIEFEYKKIEAIAEERLLEMVPEEFKEDYRPLLVA
DEADEEIKHLVKSADTLCAYLKCLEELKAGNREFNTARTRLEAMLDANPHPAVKYFIDCY
VPSFKLDLDQINRML
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcttttcgcccatctcgctcgcctcaaattaattcaacgctggccgcttatg
ttcaacgttcgctccgagaatgtgcaggagcattcattgcaggtagccatggttgcccac
ggtcttgctgtgattgccaaacgtcagttcggtatcgaggtcgatgcctacaaagctgca
actctggccattttccacgatgcctccgaagtgctgactggcgatctgccaaccccggta
aagtacttcaataaagatatcgagtttgaatacaaaaaaattgaagccatcgccgaagaa
agactgctcgagatggtgccggaggagtttaaagaggactatcgccccttgcttgttgca
gacgaagccgatgaagaaataaagcatctggtgaaatccgccgacaccctgtgcgcctat
cttaagtgcctggaggagcttaaagccggcaaccgcgagttcaataccgcccgcacccgc
ctcgaagccatgctggatgccaatccccatccggcggtgaagtattttatcgactgttat
gtgcccagcttcaagctggatttggatcagataaaccgcatgctctga
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