KEGG   ORTHOLOGY: K08722
Entry
K08722                      KO                                     
Symbol
yfbR
Name
5'-deoxynucleotidase [EC:3.1.3.89]
Pathway
map00230  Purine metabolism
map00240  Pyrimidine metabolism
map01100  Metabolic pathways
map01232  Nucleotide metabolism
Reaction
R01569  thymidylate 5'-phosphohydrolase
R01664  2'-deoxycytidine 5'-monophosphate phosphohydrolase
R01968  2'-deoxyguanosine 5'-monophosphate phosphohydrolase
R02088  2'-deoxyadenosine 5'-monophosphate phosphohydrolase
R02102  2'-deoxyuridine 5'-monophosphate phosphohydrolase
R10776  2'-deoxyribonucleoside 5'-monophosphate phosphohydrolase
R12958  dIMP phosphohydrolase
Brite
KEGG Orthology (KO) [BR:ko00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    K08722  yfbR; 5'-deoxynucleotidase
   00240 Pyrimidine metabolism
    K08722  yfbR; 5'-deoxynucleotidase
Enzymes [BR:ko01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.89  5'-deoxynucleotidase
     K08722  yfbR; 5'-deoxynucleotidase
Other DBs
COG: COG1896
GO: 0002953
Genes
ECO: b2291(yfbR)
ECJ: JW2288(yfbR)
ECD: ECDH10B_2453(yfbR)
EBW: BWG_2065(yfbR)
ECOK: ECMDS42_1862(yfbR)
ECOC: C3026_12780
ECE: Z3552
ECS: ECs_3175(yfbR)
ECF: ECH74115_3430(yfbR)
ETW: ECSP_3165(yfbR)
EOI: ECO111_3039(yfbR)
EOJ: ECO26_3279(yfbR)
EOH: ECO103_2755(yfbR)
ECOO: ECRM13514_3047(yfbR)
ECOH: ECRM13516_2991(yfbR)
ESL: O3K_08045
ESO: O3O_17590
ESM: O3M_07995
ECK: EC55989_2535(yfbR)
ECG: E2348C_2431(yfbR)
EOK: G2583_2828(yfbR)
ELH: ETEC_2426
ECW: EcE24377A_2584(yfbR)
ECP: ECP_2330
ENA: ECNA114_2381(yfbR)
ECOS: EC958_2626(yfbR)
ECV: APECO1_4273(yfbR)
ECX: EcHS_A2440(yfbR)
ECM: EcSMS35_2446(yfbR)
ECY: ECSE_2548
ECR: ECIAI1_2365(yfbR)
ECQ: ECED1_2755(yfbR)
EUM: ECUMN_2630(yfbR)
ECT: ECIAI39_2438(yfbR)
EOC: CE10_2673(yfbR)
EBR: ECB_02216(yfbR)
EBL: ECD_02216(yfbR)
EBE: B21_02176(yfbR)
EBD: ECBD_1368
ECI: UTI89_C2573(yfbR)
EIH: ECOK1_2524(yfbR)
ECZ: ECS88_2438(yfbR)
ECC: c2832(yfbR)
ESE: ECSF_2168
EKF: KO11_11245(yfbR)
EAB: ECABU_c26230(yfbR)
EDJ: ECDH1ME8569_2228(yfbR)
ELW: ECW_m2480(yfbR)
ELL: WFL_12135(yfbR)
ELC: i14_2631(yfbR)
ELD: i02_2631(yfbR)
ELP: P12B_c2385(yfbR)
ELF: LF82_3053(yfbR)
ECOI: ECOPMV1_02450(yfbR)
ECOJ: P423_12790
EFE: EFER_0878(yfbR)
EAL: EAKF1_ch3688c(yfbR)
ERUY: OSH18_19880(yfbR)
STY: STY2562
STT: t0532
STM: STM2332
SEB: STM474_2429(yfbR)
SENI: CY43_12485
SPT: SPA0532
SEK: SSPA0496
SEI: SPC_1376
SEC: SCH_2333(yfbR)
SHB: SU5_02925
SENS: Q786_11505
SED: SeD_A2680
SEG: SG2361
SEL: SPUL_0556
SET: SEN2314
SENA: AU38_11700
SENO: AU37_11710
SENV: AU39_11710
SENQ: AU40_13110
SENL: IY59_12030
SEEP: I137_02565
SENB: BN855_24140(yfbR)
SENE: IA1_11620
SBG: SBG_2118
SBZ: A464_2447
SFL: SF2367
SFX: S2502
SFV: SFV_2358
SFE: SFxv_2612(yfbR)
SFN: SFy_3366
SFS: SFyv_3441
SFT: NCTC1_02602(yfbR)
SSN: SSON_2348
SBC: SbBS512_E2667(yfbR)
SDY: SDY_2487
ENC: ECL_03635
ECLX: LI66_15370
ECLY: LI62_16870
ECLZ: LI64_14805
ECLO: ENC_39200
EEC: EcWSU1_03164(yfbR)
EPT: HWQ17_20375(yfbR)
ENZ: G0034_16110(yfbR)
ENS: HWQ15_00880(yfbR)
ENK: LOC22_03495(yfbR)
EMOR: L6Y89_15190(yfbR)
EQU: OM418_15350(yfbR)
EPU: QVH39_16150(yfbR)
ESA: ESA_00928
CSK: ES15_1183(yfbR)
CTU: CTU_29170
KPN: KPN_02681(yfbR)
KPU: KP1_3928
KPP: A79E_1420
KPT: VK055_4833(yfbR)
KPR: KPR_2024
KPJ: N559_1571
KPX: PMK1_00179(yfbR)
KPNU: LI86_07665
KPNK: BN49_3899
KVA: Kvar_1372
KPE: KPK_1466(yfbR)
KOX: KOX_26410
KOE: A225_4183
EAE: EAE_24445
EAR: CCG28931
KAR: LGL98_07375(yfbR)
KGR: JJJ10_08135(yfbR)
KPAS: LUW96_27045(yfbR)
KLC: K7H21_08145(yfbR)
REE: electrica_01466(yfbR)
RTG: NCTC13098_01980(yfbR)
CRO: ROD_26931
CKO: CKO_00504
CSED: JY391_07405(yfbR)
CAMA: F384_12230
CIX: M4I31_07570(yfbR)
CIB: HF677_007675(yfbR)
CENS: P2W74_07360(yfbR)
HDE: HDEF_1196
EBT: EBL_c12630(yfbR)
CLAP: NCTC11466_01302(yfbR)
KOR: AWR26_08060(yfbR)
KPSE: IP581_15625(yfbR)
KOB: HF650_16200(yfbR)
KOO: O9K67_07765(yfbR)
KIE: NCTC12125_00385(yfbR)
KLU: K7B04_22145(yfbR)
KCY: RIN60_07215(yfbR)
LPNU: KQ929_06000(yfbR)
BFT: MNO13_06895(yfbR)
BSEL: RHD99_06880(yfbR)
SYM: K6K13_14025(yfbR)
AHN: NCTC12129_01522(yfbR)
ASUB: NLZ15_15375(yfbR)
YRE: HEC60_10805(yfbR)
SGOE: A8O29_007055(yfbR)
PDZ: HHA33_09995(yfbR)
PSHI: SAMEA2665130_2010(yfbR)
PSGC: G163CM_03650(yfbR)
SCOL: KFZ77_13590(yfbR)
PVJ: LMA04_18980(yfbR)
SUPE: P0H77_14850(yfbR)
TOE: QMG90_07575(yfbR)
EBF: D782_1380
EBB: F652_1923
PSTS: E05_23260
YPE: YPO2559
YPK: y1627
YPH: YPC_1554(yfbR)
YPA: YPA_2050
YPN: YPN_2153
YPM: YP_2370
YPG: YpAngola_A1820(yfbR)
YPZ: YPZ3_2262
YPD: YPD4_2453
YPX: YPD8_2148
YPW: CH59_93
YPJ: CH55_52
YPV: BZ15_978
YPL: CH46_2556
YPS: YPTB2590
YPO: BZ17_4048
YPI: YpsIP31758_1449(yfbR)
YPY: YPK_1557
YPB: YPTS_2685
YPQ: DJ40_3953(yfbR)
YPU: BZ21_1886
YPR: BZ20_3619
YPC: BZ23_2170
YPF: BZ19_1951
YEN: YE1340
YEY: Y11_02121
YEW: CH47_759(yfbR)
YET: CH48_314
YAL: AT01_1187
YFR: AW19_1865(yfbR)
YIN: CH53_386
YKR: CH54_3921
YRO: CH64_1206
YRU: BD65_850
YMO: HRD69_11830(yfbR)
YAS: N0H69_10200(yfbR)
YKI: HRD70_11605(yfbR)
SMAR: SM39_2905
SMW: SMWW4_v1c34200(yfbR)
SPE: Spro_3311
SPLY: Q5A_017520(yfbR_1)
SMAF: D781_3101
SERF: L085_11580
SFJ: SAMEA4384070_3427(yfbR)
SOF: NCTC11214_03366(yfbR)
SURI: J0X03_06950(yfbR)
SENP: KHA73_16665(yfbR)
SNEM: NLX84_17150(yfbR)
SNEV: OI978_15355(yfbR)
SGRI: SGBXF1_03376(yfbR_1)
RACE: JHW33_00800(yfbR)
RAA: Q7S_06040
RVC: J9880_14110(yfbR)
RBON: QNM34_06445(yfbR)
RIU: I2123_08305(yfbR)
EAME: GXP68_06675(yfbR)
RBAD: H2866_01535(yfbR)
RCB: O1V66_02135(yfbR)
CARU: P0E69_06000(yfbR)
ECA: ECA3034
PATR: EV46_14990
PATO: GZ59_30390
PCT: PC1_2775
PEC: W5S_1374
PARI: I2D83_07535(yfbR)
PAQU: DMB82_0007410(yfbR)
PVZ: OA04_30250(yfbR)
PPAV: LOZ86_07680(yfbR)
PQU: IG609_006520(yfbR)
PPOO: LW347_14210(yfbR)
PCAC: OI450_11875(yfbR)
PACB: M9782_16490(yfbR)
PCOA: PJ912_04030(yfbR)
DDD: Dda3937_04026(yfbR)
DDQ: DDI_2714
DAQ: DAQ1742_01349(yfbR)
DLC: O1Q98_05710(yfbR)
BIZ: HC231_07210(yfbR)
PROD: PCO85_15025(yfbR)
LPOP: I6N93_11005(yfbR)
SGL: SG1603
SOD: Sant_1339(yfbR)
PES: SOPEG_2852(yfbR)
SLIG: GTU79_19140(yfbR)
EAM: EAMY_2377(yfbR)
EAY: EAM_2295(yfbR)
ETA: ETA_12010(yfbR)
EPY: EpC_12570(yfbR)
EPR: EPYR_01340(yfbR)
EBI: EbC_30820
ERJ: EJP617_34380(yfbR)
ETP: LU633_17405(yfbR)
ERP: LJN55_15970(yfbR)
ETO: RIN69_15590(yfbR)
PAM: PANA_2639(yfbR)
PLF: PANA5342_1417(yfbR)
PAJ: PAJ_1927(yfbR)
PVA: Pvag_2109(yfbR)
PSTW: DSJ_17090
PER: LAC65_10555(yfbR)
PJI: KTJ90_05935(yfbR)
PANO: OJ965_08390(yfbR)
KPIE: N5580_05440(yfbR)
PALF: K6R05_06045(yfbR)
MINT: C7M51_02106(yfbR)
MTHI: C7M52_00741(yfbR)
MHAN: K6958_13995(yfbR)
TPTY: NCTC11468_02511(yfbR)
PLU: plu3092
PAY: PAU_01516(yfbR)
PMR: PMI1766
PHAU: PH4a_00540
PPEE: I6G31_16040(yfbR)
PAPP: QQS39_12505(yfbR)
XBO: XBJ1_2930
XBV: XBW1_3154
XNE: XNC1_2806
XNM: XNC2_2701
XDO: XDD1_2599
XPO: XPG1_1227
XBU: HGO23_07705(yfbR)
XGR: QL128_07105(yfbR)
PSI: S70_02420
PSX: DR96_3646(yfbR)
PTHA: OI982_20955(yfbR)
PRG: RB151_026750(yfbR_2)
PHEI: NCTC12003_01552(yfbR_2)
PRJ: NCTC6933_02344(yfbR_2)
PVC: G3341_08085(yfbR)
PMAG: JI723_08040(yfbR)
PHAG: PZ638_08165(yfbR)
PZJ: QS795_010670(yfbR)
MMK: MU9_2561
ANS: ArsFIN_26460(yfbR)
AET: LDL57_05330(yfbR)
AAPC: QG404_06630(yfbR)
MWI: MNY66_09885(yfbR)
ETD: ETAF_2163(yfbR)
ETE: ETEE_0416(yfbR)
ETR: ETAE_2392
EDL: AAZ33_12470(yfbR)
LRI: NCTC12151_01240(yfbR)
GKN: PVT67_06460(yfbR)
HPIT: NCTC13334_01255(yfbR)
PMU: PM0747
PMV: PMCN06_0811(yfbR)
PMP: Pmu_08190
PMUL: DR93_1579(yfbR)
PDAG: 4362423_00968(yfbR)
PCAI: K7G93_000849(yfbR)
AAT: D11S_1106
AAN: D7S_00235
AACN: AANUM_1967
ASEG: NCTC10977_01568(yfbR)
AGJ: J5A60_05375(yfbR)
AVT: NCTC3438_01704(yfbR)
RPNE: NCTC8284_02661(yfbR_1)
RHAE: IHV77_01245(yfbR)
PAET: NCTC13378_00526(yfbR)
VCH: VC_1978
VCS: MS6_1735
VCI: O3Y_09555
VVY: VV1113
VPA: VP0926
VPB: VPBB_0884
VAG: N646_3076
VSP: VS_2195
VNI: VIBNI_A2417(yfbR)
VAN: VAA_3320
VEU: IXK98_18825(yfbR)
VSI: MTO69_04770(yfbR)
VSC: VSVS12_01282(yfbR)
VTA: A1990(yfbR)
VAQ: FIV01_09690(yfbR)
VSR: Vspart_01089(yfbR)
VKA: BTD91_10985(yfbR)
VZI: G5S32_09725(yfbR)
VNV: IF132_10690(yfbR)
VGI: MID13_04430(yfbR)
VSL: LTQ54_04295(yfbR)
VPL: SA104470976_01683(yfbR)
VJP: NP165_04745(yfbR)
VPG: LZI70_02495(yfbR)
VOS: KNV97_08200(yfbR)
VCRA: IS519_05770(yfbR)
VNP: KW548_13425(yfbR)
VLE: ISX51_11555(yfbR)
VRU: RND59_00835(yfbR)
VMT: QYQ96_04550(yfbR)
PPR: PBPRA2627(SF2367)
PGH: FH974_11095(yfbR)
GKD: K6Q96_04675(yfbR)
SCOT: HBA18_09890(yfbR)
SPRO: N7E60_10390(yfbR)
ELUX: BTN50_1302
MAQ: Maqu_0157
MHC: MARHY0154
MAD: HP15_3866
MBS: MRBBS_0180(yfbR)
MARJ: MARI_26670(yfbR)
MALL: PBN92_00740(yfbR)
MSAN: LPB19_04615(yfbR)
PSPI: PS2015_854
SON: SO_2484(yfbR)
SDN: Sden_1994
SFR: Sfri_1906
SAZ: Sama_1696
SLO: Shew_1913
SSE: Ssed_2345
SPL: Spea_2047
SHL: Shal_2247
SWD: Swoo_2265
SWP: swp_2620
SVO: SVI_2028
SPSW: Sps_00776
SKH: STH12_01373(yfbR)
SLIT: JQC75_08465(yfbR)
SDK: KHX94_19015(yfbR)
SEUR: FM038_012745(yfbR)
SYK: KDN34_08900(yfbR)
SCYP: JYB88_09185(yfbR)
SAVI: JYB87_08550(yfbR)
SSEM: JYB85_09375(yfbR)
SINV: K8B83_11995(yfbR)
SXM: MKD32_09520(yfbR)
SVM: KDH10_000874(yfbR)
SHEJ: MZ182_09500(yfbR)
SSEH: N7V09_12650(yfbR)
SACH: K0H61_08680(yfbR)
SAEG: K0H80_09725(yfbR)
SDEO: D0436_09780(yfbR)
SMES: K0I73_09765(yfbR)
SHAO: K0H81_10170(yfbR)
SZH: K0H63_09135(yfbR)
SSPA: K0I31_09880(yfbR)
SHNS: K0J45_09775(yfbR)
SRHS: K0I63_09885(yfbR)
SPSJ: K0I62_10135(yfbR)
SMAY: K0H60_10775(yfbR)
SOG: RA178_11825(yfbR)
CPS: CPS_3233
THAB: LP316_09260(yfbR)
THAT: H3N35_10620(yfbR)
TACT: SG35_011215(yfbR)
TVD: SG34_018200(yfbR)
PSYM: J1N51_01695(yfbR)
AMAC: MASE_10685
AAUS: EP12_11690
APEL: CA267_000790(yfbR) CA267_016890(yfbR)
SMAA: IT774_09245(yfbR)
GNI: GNIT_1742
GPS: C427_2818
SALH: HMF8227_01578(yfbR)
PAEW: KIH87_08190(yfbR)
CATT: OLW01_04105(yfbR)
ALII: QR722_09870(yfbR)
PMAW: MACH26_22730(yfbR)
FES: HER31_04135(yfbR) HER31_11835(yfbR)
MVS: MVIS_3399
MYA: MORIYA_4087(yfbR)
MOQ: HWV03_05005(yfbR)
SAGA: M5M_17085
MCA: MCA0827
MMEO: OOT43_06635(yfbR)
MPAD: KEF85_14640(yfbR)
MELL: IVG45_08350(yfbR)
MRP: NM686_007005(yfbR) NM686_015865(yfbR)
MMOT: QZJ86_03395(yfbR)
MESL: KKZ03_16020(yfbR)
HCH: HCH_03679
HAHH: O5O45_09060(yfbR)
PLEI: Q9312_17465(yfbR)
AHA: AHA_2008
ASA: ASA_1886
AVR: B565_2221
AMED: B224_2575
ACAV: VI35_09890
AEL: NCTC12917_01897(yfbR)
AALL: I6G90_03945(yfbR)
AJD: I6H43_20320(yfbR)
ARIV: KYK33_11135(yfbR)
ASAA: KXJ75_10775(yfbR)
ABES: IU367_12230(yfbR)
TAU: Tola_2690
OCE: GU3_12345
OPE: PU634_09480(yfbR)
GAQ: RAM11_10820(yfbR)
ORB: IPMB12_04360(yfbR)
CDIZ: CEDIAZO_01289(yfbR)
SADE: GFK82_00669(yfbR)
GLO: Glov_1584
CSUA: IM538_12065(yfbR)
ALKL: MM271_03100(yfbR)
PMW: B2K_08170
PRI: PRIO_2355
PSON: JI735_20535(yfbR)
PSWU: SY83_21530
PRZ: GZH47_23900(yfbR)
PLYC: GXP70_22645(yfbR)
PTRI: KDC22_10065(yfbR)
PCEL: HUB94_09740(yfbR)
PTJ: JRJ22_08935(yfbR)
PTHI: NDS46_21335(yfbR)
PDY: QJQ58_00735(yfbR)
PWN: QNH46_08905(yfbR)
PSPN: L1F29_24490(yfbR)
PAUN: MJA45_20190(yfbR)
PKP: SK3146_02277(yfbR)
CHEB: HH215_12685(yfbR)
KEB: GXN75_15320(yfbR)
CTH: Cthe_2359
HSC: HVS_02535(yfbR)
CCE: Ccel_1803
RHER: EHE19_009160(yfbR)
RPAY: P0092_12460(yfbR)
CSD: Clst_0355
CCEL: CCDG5_0105
RUC: LCN94_07965(yfbR)
FPR: FP2_09550
FPA: FPR_16530
OVA: OBV_39970
OBJ: EIO64_13085(yfbR)
CAML: H6X83_00145(yfbR)
ACOL: K5I23_08080(yfbR)
LASA: L9O85_01225(yfbR)
TMEL: NOG13_06435(yfbR)
AIM: PYS61_03865(yfbR)
ANQ: PYS63_05410(yfbR)
CFEM: HCR03_13340(yfbR)
EVN: NQ558_07525(yfbR)
ALAC: JYE50_00840(yfbR)
AHC: JYE49_01640(yfbR)
BPEN: NQ488_09130(yfbR)
CBAF: JS518_08015(yfbR)
BPB: bpr_I2014
BHU: bhn_I1826
BCRO: NQ527_05345(yfbR)
CEV: LK421_03265(yfbR)
CPY: Cphy_0261
HSD: SD1D_2073
WCP: H9Q76_03085(yfbR)
STOM: QU660_09080(yfbR)
LBX: lbkm_3573
VPR: Vpar_0282
VRM: 44547418_00296(yfbR)
VDN: NCTC11831_00268(yfbR)
VNK: VEIT17_02730(yfbR)
VRG: OKW85_01500(yfbR)
MANA: MAMMFC1_01844(yfbR)
APV: Apar_0292
OLS: Olsu_0364
TIO: INP52_08240(yfbR)
 » show all
Reference
  Authors
Zimmerman MD, Proudfoot M, Yakunin A, Minor W
  Title
Structural insight into the mechanism of substrate specificity and catalytic activity of an HD-domain phosphohydrolase: the 5'-deoxyribonucleotidase YfbR from Escherichia coli.
  Journal
J Mol Biol 378:215-26 (2008)
DOI:10.1016/j.jmb.2008.02.036
  Sequence
[eco:b2291]
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