Shewanella khirikhana: STH12_04039
Help
Entry
STH12_04039 CDS
T06711
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
skh
Shewanella khirikhana
Pathway
skh00300
Lysine biosynthesis
skh00550
Peptidoglycan biosynthesis
skh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STH12_04039 (murE)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
STH12_04039 (murE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
skh01011
]
STH12_04039 (murE)
Enzymes [BR:
skh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
STH12_04039 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:
skh01011
]
Precursor biosynthesis
Amino acid ligase
STH12_04039 (murE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AZQ13073
LinkDB
All DBs
Position
4574791..4576254
Genome browser
AA seq
487 aa
AA seq
DB search
MMLLKDLLAPWFHYAGTESVNAPVLDSRQVSEGGLFVAIPGHAVDGRNFIGAALAKGAAA
VLTHTDDPAAHGLVEREQGLVIHFFQLSRQVSALARQYYELTPGKLHTVGITGTNGKTSV
SQLIAQLSEQLGSRAAVMGTLGNGLWGELEDVGNTTADPIRVMADLHHFETRGAGVCAME
VSSHGLVQGRVEAVPFEVAVFTNLSRDHLDYHGDMENYGAAKRRLFAFGSLKASVINLDD
AVGEGWFAGMGHAVGFSCEGHPKAAWRFEQARFHHAGFSATLVCPEGEFALECRLLGAFN
LSNLLAALCVMNQLGYSADSLVQAAAKLTPVPGRMECFPCADGLSLVVDYAHTPDAIEQA
LKAARHHCEGQLWIVFGCGGDRDKGKRPLMAAAAERFADQLVLTSDNARSEDPQAILDDM
KAGLKTPEDALFEVDRIQAIRRAVALAKPGDLILLAGKGHETYQEIAGVKHQYDERALAK
ALCEEKS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgttgaaagatttattggcgccctggttccactatgccggtactgaaagtgtt
aatgcgcctgtgctcgacagtcgtcaggtcagcgaaggcggcctgtttgtggccattccc
ggccatgccgtcgatggccgcaattttatcggtgccgcccttgcaaaaggcgccgcggca
gtactgactcacacagatgaccctgcggcccatggtttggtggagcgtgagcaggggctg
gtgatccatttcttccagctcagccgtcaggtgtcggcgctggcccgtcaatactatgag
ctgacacccggcaagctgcacacagtcggtatcacagggaccaatggcaagacctcggtc
agccaactgattgcccagctttctgagcagctcggcagccgcgcagcggtaatgggtacc
ctcggcaatggcctgtggggcgagcttgaagatgtgggtaacaccaccgccgaccccatt
cgggtgatggcggatttacaccatttcgaaacgcgtggcgccggggtatgtgccatggaa
gtctccagccacgggttggtgcagggacgggttgaagccgttccctttgaagtggcggta
tttaccaacttaagccgcgaccacctggattaccacggtgacatggaaaactacggcgct
gccaaacgtcgtctgttcgccttcggcagccttaaggccagtgtgatcaacctggacgac
gccgtaggcgaaggctggtttgccggaatggggcacgcggtaggtttcagctgcgaaggg
catcccaaggccgcctggcggtttgagcaggcccgcttccatcatgccggattcagcgcc
accctggtgtgccccgaaggtgaatttgccctcgagtgccgtctgcttggtgcctttaac
ctgtccaacctgctcgctgccctgtgcgtgatgaaccagcttggttacagcgccgactct
ctggtgcaggcggctgcaaaactgacgccggtacccggtcggatggagtgtttcccctgc
gcagatggtctgtcgctggtggtcgattacgcccacaccccggatgccatcgagcaggcg
ctcaaggcggcgcgtcatcactgcgaaggccagctgtggattgtatttggctgcggcggc
gatcgcgataaaggcaagcgtcctttgatggcggcagctgccgagcgttttgccgatcag
ctggtgctgacttccgacaatgcccgcagtgaagatccgcaggccattctcgatgatatg
aaggccggactgaaaacgcccgaagatgcgctgttcgaagtagaccgcattcaggctatc
cgccgcgctgtggcgctggccaaacccggcgaccttatcctgctggccggtaaaggccat
gaaacctatcaggaaattgccggcgtgaaacaccaatacgatgaacgcgccctggcaaag
gcgctttgtgaggagaaatcgtga
DBGET
integrated database retrieval system
