Shewanella khirikhana: STH12_04049
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Entry
STH12_04049 CDS
T06711
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
skh
Shewanella khirikhana
Pathway
skh00540
Lipopolysaccharide biosynthesis
skh01100
Metabolic pathways
Module
skh_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
STH12_04049 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
skh01005
]
STH12_04049 (lpxC)
Enzymes [BR:
skh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
STH12_04049 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
skh01005
]
Lipid A
STH12_04049 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AZQ13083
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All DBs
Position
4587343..4588236
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AA seq
297 aa
AA seq
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MVKTTGVGLHSGNKVTLTIKPAPINTGIVLMRTDLNPAVAIPAKANMVRETTMCTALVND
EGVRISTIEHLFAALAGLGIDNAVIEVDAPEIPIMDGSASPFVFLLQSAGIQEQSAAKKY
LRIKRTVRVEDGDKWAEIRPFQGFRVNFAIDFNHPEIARSQQHMVMDFSSTAFVKDISRA
RTFGFMRDIEYLRANNLALGGSMENAVVLDEYRVLNPDGLRYEDEFVKHKILDAFGDLYV
AGHAIIGEFCAYKTGHALNNQLVRAVLAAQDAWELVSFDKEADAPVSFAMPGSVVLA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggttaagaccaccggtgttggattgcactccggtaacaaggtcacactcaccattaaa
cccgcgcctatcaatacagggatcgtactgatgcgtactgacctgaacccagccgtggcc
attccagccaaggcaaatatggttcgggaaaccaccatgtgtacggccctggtaaatgat
gaaggtgttcgcatttcgacgatcgagcacctgtttgccgccctggcaggtctcggcatt
gataatgccgtaatagaagtggacgcgcctgaaatcccgattatggatggcagtgccagc
cccttcgtattcctgctgcagagcgccggtattcaggagcagtcagcggccaaaaaatat
ctgcgtatcaagcgcaccgtacgcgtggaagacggcgacaagtgggcggaaatccgtccg
ttccaggggtttcgagtcaactttgccattgacttcaaccaccctgagatcgcgcgcagc
cagcagcatatggtgatggacttttcctcgactgcctttgtgaaagatatcagccgtgcc
cgcacctttgggtttatgcgcgatatcgaatacctgcgtgccaacaacctggcgctcggt
ggcagcatggaaaatgccgttgtgcttgatgaataccgcgtcctcaaccccgatggcctg
cgttatgaggacgagttcgttaagcacaagatcctggatgcatttggcgatctctatgtc
gccggtcatgccatcataggtgagttttgtgcctataagaccggccacgccctgaacaac
caattggtcagggcggtgcttgccgctcaggatgcctgggaactggtgagctttgacaaa
gaagccgacgcacctgtcagcttcgccatgccaggcagtgtggttcttgcctga
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