Sinorhizobium kummerowiae: PZL22_002517
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Entry
PZL22_002517 CDS
T09063
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm00300
Lysine biosynthesis
skm00550
Peptidoglycan biosynthesis
skm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PZL22_002517
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PZL22_002517
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
skm01011
]
PZL22_002517
Enzymes [BR:
skm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PZL22_002517
Peptidoglycan biosynthesis and degradation proteins [BR:
skm01011
]
Precursor biosynthesis
Amino acid ligase
PZL22_002517
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WHS94775
LinkDB
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Position
complement(1121907..1123367)
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AA seq
486 aa
AA seq
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MKITDLAGSNFPELSAQLKGDAANIEIGGITADSRQVKPGDLFVAVAGSKADGAAYVADA
MSRGAAAVVAGTGAPAEAGAPVFAISDPRRFLAKAASSFYGRQPETMVAVTGTAGKTSVA
SFTRQIWAHSGFSAAMIGTTGVVAPGRTEYGSLTTPDPVSLHKLLAELADEGVTHAAMEA
SSHGLDQRRLDGVELAAAAFTNLGRDHMDYHPTVEHYMASKMRLFGALLPKGSPAVIFAD
DQWSAEAIAAARKAGHDVRTVGRNGDFIALKRVEHFRHKQSAEVHVGDDIYEIHVPLAGD
FQIANALVAAGLAMSTGITAKAAFSALERLQGASGRLELVGQTKDGALAYVDYAHKPDAL
ANVLESVRPFTTGRVVVVFGCGGDRDKGKRPIMGEIASRLADVVIVTDDNPRSEVPEVIR
AEIMAAAKGATEIGDRAEAIRAAVGMLKTGDTLIVAGKGHEEGQTVGSVTLPFSDHAEVR
KALGGL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacggacctggcgggatcgaatttcccggaactttcggcgcagctgaagggc
gatgccgcgaacatcgagatcggcggcatcaccgccgatagccggcaggtcaagcccggc
gacctcttcgttgcggtcgccggatcgaaggcggacggggctgcctacgtagcggacgca
atgtctcgcggagctgcggcggtcgtcgccggaaccggcgccccggcagaagcgggtgcg
cccgtctttgcgatctccgacccgcgcaggttccttgcaaaagcggcatccagcttctac
ggacgacagccggagacgatggtggcggtcacgggcacggcgggaaagacgtccgttgcc
tccttcacccggcagatctgggcgcatagcggcttctcggcggcgatgatcggcaccacg
ggggtggtggcgcccggccgcaccgaatacggctcgctgacgacccccgacccggtatcc
ctgcataagctgcttgccgaactcgccgacgagggcgtgacccatgcggcaatggaggct
tcgagccacgggctggaccagaggcggctggacggggtcgagctcgcggccgccgccttt
accaatctcggccgcgatcacatggattaccatccgactgtcgagcactacatggcctcc
aagatgcgcctcttcggggcgctcctgccgaaaggttcgccggcggtgatcttcgcagac
gaccaatggtccgccgaggcgatcgctgccgctcgcaaggcaggccacgatgtgcgcacc
gtcgggcgcaacggcgatttcatcgcgctgaagcgcgtcgagcatttccgtcacaagcag
tcggcggaggttcatgtcggcgacgacatctacgaaattcacgtgccgctcgccggtgat
ttccagatcgccaacgcgctcgttgccgcgggcctcgcaatgtccaccgggatcaccgca
aaggcggcattctcggcgctggagaggctgcagggcgcttcggggcggctggagcttgtc
ggacagacgaaggacggcgcactcgcctatgtggattacgcccacaagccggacgcactc
gcaaacgtgctggagtccgtgcgtccctttaccaccggccgggtcgtggtggttttcggg
tgcggcggcgaccgggacaagggcaagcgcccgatcatgggagagattgccagccgcctc
gccgacgtcgtgatcgtcaccgacgacaatccgcgttcggaagtaccggaagtgatccgt
gccgagatcatggccgcggccaagggggctacggaaatcggcgatcgcgccgaggcgatc
cgcgcggctgtcggcatgctgaagaccggcgatacgctgatcgttgccggaaaggggcat
gaagaggggcagacggtcggttccgtgacgctgcctttctccgaccacgcggaggtccgc
aaggcactgggaggtctttga
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