Saccoglossus kowalevskii (acorn worm): 100369398
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Entry
100369398 CDS
T04123
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04137
Mitophagy - animal
sko04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100369398
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100369398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100369398
04121 Ubiquitin system [BR:
sko04121
]
100369398
Enzymes [BR:
sko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100369398
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100369398
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
100369398
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF_BIRC3_bd
TRAF3_RING
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
GEX3_C
TRAF2_zf
CCDC22_CC
zf-C3HC4_2
Baculo_PEP_C
HAUS1
YkyA
Sec8_N
SlyX
HDR1
Fez1
CCDC39
Sec20
CLIP1
Motif
Other DBs
NCBI-GeneID:
100369398
NCBI-ProteinID:
XP_077862643
UniProt:
A0ACM8C8G0
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MVGFPLSIIVNKDFAQDKFLCQNCKQLLKDPLQTYCGHRYCRECFEIICEREKNPRCHAC
AEEDDYFLKNDETFPDRGILRELNKINVKCPNNMCNWKGTYMEYGKVHEAACPWALIECI
KHGCDAMVTRNKLANHLENMCFMRLERCIHCQSEETFSELELNGHLESECSRKMVDCPFQ
DVGCKTLVRKDDISSHNLTTVGEHSVLLLNQTKELSDVIQNMECKRGEVYRIKEQVVEHR
TKLSELRTEIQRLCTHMCHTGDQPSVLSQKQNKQVHDTVEQQTKTLSSFQEKLKSLETNI
HTYEGVITVLNNQIEQDARTMHTMQTQAIQHVDRIQALERKVSAQDQLLKELALAKQDNT
MSEMASHDGELVWKITNFLKKRNDAVSRKTVSIYSPCFYTSRHGYKMCARIYLNGDGMGK
GNHVSLFFVIMKGQFDALLRWPFRQKVTLMWLDQNNREHVIDAFRPDPTSSSFKRPEQDM
NVASGCPLFMPLTELNSSRHAYVKDDVAFIKIIVDTTDIT
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggttggatttcccctttctataatagtaaacaaggattttgctcaagacaaatttctc
tgccaaaactgcaaacagctactaaaggaccctttgcagacatattgtggacatcgttat
tgcagagaatgttttgagatcatctgtgagagggagaaaaatccccgctgtcacgcatgc
gctgaagaagatgattactttctaaaaaatgatgagacatttcctgatcgaggcattcta
agagaactcaataagataaacgtaaaatgtccaaataacatgtgtaattggaagggcaca
tatatggaatatggcaaggttcatgaagcagcttgcccctgggctttaatagagtgtatt
aaacatggatgtgacgcaatggtgacgagaaataaattagcaaaccatctggaaaacatg
tgcttcatgagacttgagcgatgtattcattgtcaatcagaagaaacgttcagtgaatta
gagttaaatggtcatcttgaatctgaatgttcgagaaagatggtagattgtccatttcag
gatgttggatgtaaaacactagtaagaaaagatgacattagtagtcacaatctaacaacc
gtcggtgagcattctgtattgctattaaatcaaacgaaagaactgtctgatgtgatacaa
aatatggaatgcaaacgtggcgaggtatatcgcataaaagaacaggtggtagaacatcga
accaagttaagtgagctccgaacagaaatacagagactatgcacacacatgtgtcacact
ggggatcaaccctctgttctgtctcagaagcaaaacaaacaagtgcatgacactgtagag
caacaaacaaaaacactatcttcttttcaggagaaattgaaatcacttgaaactaacatt
catacatatgaaggggtcataactgtgttgaacaatcaaatagaacaagatgcgagaact
atgcacaccatgcaaactcaagcaatacaacacgtagatcgcatacaggcattggaacgt
aaagtcagtgcgcaagaccaacttttgaaagaattggcactagcaaaacaagataataca
atgtcagagatggcatctcatgatggtgagttggtttggaaaattaccaattttctcaaa
aaacgcaatgatgctgtatcgcgtaaaactgtgtcaatttactccccatgtttctacact
agtcgccatggttacaaaatgtgtgcccgtatttacctcaatggtgatggaatgggaaaa
ggcaatcatgtgtctttgttctttgtcatcatgaaaggtcaatttgatgctcttctgaga
tggccatttcgtcagaaagttaccttaatgtggttggatcaaaacaacagagagcatgtt
attgatgcatttcgacctgatccaacgtccagttctttcaaacgaccagagcaggacatg
aatgtggctagtggatgtccactatttatgcccttaacggaactaaatagttctcgtcac
gcatatgtcaaagatgatgtagcttttataaaaatcatagttgatacaactgatataacc
taa
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