Saccoglossus kowalevskii (acorn worm): 100375408 Help Entry 100375408         CDS       T04123                                  Name (RefSeq) thrombospondin-2-like   KO K16857   thrombospondin 1 Organism sko  Saccoglossus kowalevskii (acorn worm) Pathway sko04145   Phagosome sko04148   Efferocytosis sko04350   TGF-beta signaling pathway sko04512   ECM-receptor interaction sko04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sko00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     100375408   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100375408  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     100375408    04148 Efferocytosis     100375408   09142 Cell motility    04820 Cytoskeleton in muscle cells     100375408  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sko04131]     100375408   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sko00536]     100375408 Membrane trafficking [BR:sko04131]  Endocytosis   Phagocytosis    Opsonins     100375408 Glycosaminoglycan binding proteins [BR:sko00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100375408 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_ADAMTS EGF_3 cEGF EGF Laminin_G_2 Laminin_G_3 Laminin_G_1 Amnionless TSP1_CCN Motif Other DBs NCBI-GeneID:  100375408 NCBI-ProteinID:  XP_006811593 LinkDB All DBs Position Un AA seq 1153 aa AA seqDB search MVAILSSSTRHLSSPLLIFVTFLVAACLSEEIDLFDAVGVDENTEGVRKVAGPDPNALAL KFRLKSPVSLTAPDSVLKELLESMRTDAGFVFTTSLKQDRGNRGSLVSIDSKVGNRRQFG LHSNTKTNSVDLFYTMQDHTNTPIEMLGTFNGVTLADGQWHNMTLVVADSVAVLHVDCQR VGLLTLHTPFYMDMQSEGYSLQIVQGAQDTAIVRNFKGLLQNIKFITEASYETYLAEQGC PEELRPFVPTTPSPIDNNVDNGFRYDCQYTCKELIDIFNEVDRMGAETEELKRIIGAPPD GGCFYDSIFHSNGSDWIVNKCKKCSCKDSKVSCSLIECPVVTCKEPVVLEDQCCPVCSMN DEVDGWSAWSDWTPCSVTCGVGRQQRGRSCDTINYPCKGSDVETKVCVEKDCDDKVRIDG GWSLWSPWTCTVTCGEGLETRIRMCNSPRPQLGGDDCDGPNRENRACSRDPCPVHGEWGA WSPWSSCSLTCDGGTKERLRGCDSPAPAYGGSDCAGSPSQIRNCNIQPCPIDACLLNPCF EDVDCTSFPDGSYTCGKCPIGYTGNGETCEDINECKLVPSACFRYGGAHMCRNYDGGYHC EACPIGYRGNQPEGSGVEEAASNKQQCEPVNPCRDRTHNCANHAECIYYGPRSEPPYGCK CKVGYAGSGFECGEDSDLDGWPDESLNCLDIDETTHCVKDNCPYLPNSGQEDMDNDLIGD ACDDDDDDDGIPDNRDNCPMVANTYQRDYDADEVGDYCDNCPYDANIYQKDTDNDGAGDE CDDDIDNDGILNERDNCQKVDNRDQLDSDGDGVGDLCDNCKFVANSEQGDKDHDWVGDEC DTNLDKDRDGHQDDIDNCPDEPNSSQLDTDEDGIGDACDDDDDNDGVPDEIDNCRLVANQ DQLDSDDDGVGDACYNDFDGDGVEDKFDACPEHRWIRQTDFTSFQTITLDPKGDSQIDPN WLVRNRGKELIQTTNSDPGLAVGYDFFDAVEFSGTFYINTDSDDDYAGFVFGFQSSSQFY AVMWKQMYQSYWLQTPTEAIGHAGLQIKLVNSTTGPGERLRNALWHTGDTPGQVKLLWSD PNAIGWKDFTAYRWTLTHLPVTGYMRVVMYEGSRVMADSGAIFDTTFGGGRLGLFVFSQE MVFFSDMKYKCIS NT seq 3462 nt NT seq  +upstreamnt  +downstreamnt atggtggcgatattatcatcgtctacgcggcatttgtcatcgcctttacttatattcgtt acattccttgtcgcagcgtgcctttcagaagaaatcgacttatttgatgcggtgggcgtg gatgaaaatacagaaggagtgagaaaggtagccgggccagatccaaatgccttagcattg aaatttagattgaaatcacccgtgagcctgacagcaccagatagtgttctaaaagaactt cttgaatcaatgcggaccgatgctggttttgtgtttaccacatctcttaagcaagaccgg ggcaaccgaggtagtctagtctcgattgactctaaagttggcaacaggcggcagttcggt cttcacagcaacactaagaccaactcagtcgacttgttttacacgatgcaagaccatact aatacaccgattgagatgctgggcacttttaacggcgttactttagccgatgggcagtgg cacaacatgactctcgtggtagctgactccgttgccgtgttacatgtggattgccagaga gtgggacttcttaccctgcacacaccgttctacatggatatgcaatcagagggctactcg ctgcagatcgtccagggggcgcaagacactgccattgtcagaaatttcaagggacttctc caaaacattaagttcatcactgaagcctcgtacgaaacttatctcgcagaacaaggttgc ccagaagagctcagaccattcgtaccaaccacgccctcgccgatagataacaacgtagac aatggtttccgttatgattgccagtatacatgtaaggaattaatagatatattcaatgag gtcgacagaatgggggctgaaaccgaggaactgaaaagaataattggtgcacccccagac ggaggttgtttctatgacagcatttttcatagtaacggcagtgactggatcgttaacaaa tgcaaaaagtgttcttgcaaggattcaaaagtatcatgcagccttatcgagtgccccgta gtcacgtgtaaagagccagtggtgttagaagaccaatgctgcccggtctgctctatgaat gatgaagttgatggctggagcgcctggtctgattggacgccttgttccgtgacgtgtggt gtcgggaggcagcagcgaggacggtcatgtgacactattaactacccttgcaaaggaagt gacgttgaaaccaaagtatgcgtcgaaaaggattgtgacgataaagttcgaattgatggt gggtggagcttatggtcgccatggacatgtaccgtaacctgcggtgagggacttgagact cgtatacgtatgtgtaattctccgcgaccgcaactcggcggagacgattgtgatggacca aacagagaaaatagagcatgtagtcgggatccatgcccagtgcatggtgaatggggtgcc tggtctccatggagcagctgtagcctgacttgcgatggtggaaccaaggaacgccttcgt ggctgcgacagtccagctccagcatatggcggcagtgattgtgcagggagcccttcgcaa atcagaaattgcaacattcaaccgtgtcccattgatgcttgtctgttaaatccgtgtttc gaagatgtggattgtaccagctttcccgatggcagttacacgtgtgggaaatgtccaatt ggttataccggcaacggggaaacgtgtgaagatattaatgagtgtaaattggtgccgagt gcgtgtttcagatacggaggagcacatatgtgtaggaactacgatggcggctaccactgc gaggcgtgtccgattggttaccgtggaaaccagcccgagggttctggagtggaagaagca gcatcaaacaaacagcaatgtgaacctgtcaatccttgcagagatcgtactcataactgt gccaatcacgctgaatgtatatattacggacctagatcagagccaccctatggttgcaag tgtaaggttgggtatgctggaagtggttttgaatgtggcgaagatagtgacttggatgga tggccagacgaatctctcaactgcctcgatattgacgaaaccactcactgtgtgaaagat aactgtccatacttaccaaacagcggacaggaagatatggacaatgatcttatcggagat gcgtgcgacgatgacgacgacgatgacggcataccggacaacagggacaactgcccaatg gttgccaacacctaccagcgggactatgacgcggacgaagtgggtgactactgtgacaac tgtccgtatgacgctaacatttaccagaaagatacggataatgacggagctggagatgaa tgtgacgacgatattgacaacgacggtatactaaatgaacgggataactgtcagaaggtg gacaacagagatcagttggacagtgatggagatggtgttggcgatctgtgcgataattgc aaattcgtcgctaacagtgaacagggcgataaagaccatgactgggtcggtgatgaatgc gatactaatttagataaggaccgagatggtcaccaagacgacatcgacaattgcccggat gagccaaactcaagccagctggacaccgacgaagatggcattggcgatgcgtgtgatgac gatgatgacaacgacggcgtccctgacgagatcgataattgcagattagttgcaaaccaa gaccaactggattccgatgacgatggcgtgggtgatgcatgctataacgacttcgatgga gacggcgtggaagataaattcgacgcatgcccagaacatagatggatccggcaaactgac ttcaccagttttcagactatcacgcttgaccctaagggagactcccagatcgaccctaac tggcttgtcaggaacaggggcaaggaacttatccagacaactaatagtgaccccggtctt gctgtcggttatgacttcttcgacgccgtggaattcagtggcaccttctacatcaacaca gatagcgacgacgactatgcgggatttgtgtttggcttccagtcaagtagtcaattctac gccgttatgtggaagcaaatgtatcaaagctattggctgcagacgcccaccgaagcaatc ggtcacgcaggccttcaaattaagcttgtaaactccaccactggtccgggtgaaaggctc agaaacgccctctggcatacaggtgatactccgggacaagtgaagcttctctggagcgac cccaacgccattggttggaaggactttactgcttacaggtggactttaacgcatctaccg gttacaggatacatgagagttgtgatgtatgagggtagtcgggtgatggctgactctggt gccatatttgatacaacgttcggcggcggtcgtcttggtctcttcgtgttctcccaggaa atggtcttcttctcggacatgaaatacaagtgtatatcttag

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