Saccoglossus kowalevskii (acorn worm): 100378122
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Entry
100378122 CDS
T04123
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100378122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sko04131
]
100378122
04121 Ubiquitin system [BR:
sko04121
]
100378122
Membrane trafficking [BR:
sko04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
100378122
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100378122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
F-box-like
ANAPC4_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_RFWD3
F-box
Beta-prop_IP5PC_F
Beta-prop_DCAF12
WD40_like
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
100378122
NCBI-ProteinID:
XP_002736552
LinkDB
All DBs
Position
Un
AA seq
411 aa
AA seq
DB search
MGGDSVCGGDSVCGGDSVCGGDGVCGGDGVCGGDGLKQYRDFIALLPECLALKILHNLNP
RELLVVCRVSRTWNRIASSDQLWKEKCSQVEIEVPVTANMKWKTVYKDNMYLKLNWELGH
FKEVDVKGHTGKVLSITFDGRRMASGSKDTTIKIWDAKSGNLIQTLKGHSKGVWCLRFFT
RNLLISGSYDCTIKVWNLRKGSCVRTLFGHEGAVWAIVRKQNLLASASQDRTAKLWDISR
CQLLHTLRGHTQAVFCIDMDDDCKIVLTGSADRSIRVWSVETGRHTRVIWASQTTSIMAL
SYHKGYFACAVGEVLSLWKLGEPAASCVRTFQEHEKRIETLELKMAEPEKPEGIIVSAGQ
DGMVKYWDINKEKSLHTLSGHSSQVNAIHFDETKIVSASYDNKCKVWDFNI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtgacagtgtatgtggcggtgacagtgtatgtggcggtgacagtgtatgtggt
ggtgacggtgtatgcggtggtgacggtgtatgcggtggtgacggtcttaaacagtaccgt
gatttcatagctttactccctgagtgccttgccctgaagatattacataatttaaatcca
agagagttattagttgtatgtagagttagtagaacatggaatcgcatcgctagtagtgat
caactatggaaagaaaagtgcagtcaagttgaaattgaggtaccagtgactgccaatatg
aaatggaaaacagtctataaagataacatgtatttaaaactgaattgggagctaggtcac
ttcaaagaggttgatgtcaaagggcatactggaaaagtcttgtctataacctttgatggt
agaaggatggcaagtggaagtaaggatacaacaatcaaaatatgggatgccaaaagtgga
aacttaatacaaacactgaaaggtcattcgaaaggtgtctggtgtctgcgatttttcaca
cgcaatcttctgatcagtggttcatatgactgtacaataaaagtttggaatctgcggaaa
ggatcttgtgttcgtacattgtttggccatgagggtgcggtgtgggcaattgtgagaaaa
caaaacttattagcatcagcttcacaagacagaactgccaaattgtgggatattagtcgt
tgtcaattgttacatacattgcgtggacatacacaggctgtattctgcattgacatggac
gatgactgtaaaatagtgttgactggctcagctgataggagtattcgtgtatggagtgtg
gagactggcagacataccagagtgatctgggcaagtcagacaacctccatcatggcactt
agttaccacaaaggctattttgcatgtgctgtaggagaggtgctttcgctttggaaacta
ggagagccagcagcaagttgtgttcggactttccaggaacatgaaaaaagaattgagaca
ttagaattgaaaatggcagaaccagagaaacctgaaggaatcatagtgagtgctgggcaa
gatggtatggttaaatattgggatatcaacaaagagaagagtctacacactttgagtgga
cattccagtcaagtcaatgccatccactttgatgagacaaagattgtcagtgcttcctat
gacaataaatgcaaagtctgggatttcaacatctaa
DBGET
integrated database retrieval system
