Saccoglossus kowalevskii (acorn worm): 102804654
Help
Entry
102804654 CDS
T04123
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04120
Ubiquitin mediated proteolysis
sko04140
Autophagy - animal
sko04144
Endocytosis
sko04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102804654
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102804654
04140 Autophagy - animal
102804654
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102804654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sko04131
]
102804654
04121 Ubiquitin system [BR:
sko04121
]
102804654
Enzymes [BR:
sko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102804654
Membrane trafficking [BR:
sko04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
102804654
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
102804654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-TRAF
TRAF-mep_MATH
MATH_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
TRAF3_RING
zf-C3HC4_3
RING_XB3-XBAT31
zf-Nse
zf-RING_5
Sina_ZnF
Alkyl_sulf_C
Motif
Other DBs
NCBI-GeneID:
102804654
NCBI-ProteinID:
XP_006813662
LinkDB
All DBs
Position
Un
AA seq
463 aa
AA seq
DB search
MASEIRRNNVGQNRKQKKEPNQGYDAEFIPELEKKYTCPVCLVAMRDPVQTKCGHRFCKP
CMKGVCGNKRYVKCPVDNTWFDSIGDVFDDIATRREVLSLLVLCNYQPNGCEWKGELREL
QEHNSICPFEKLTCPNSCSEQFFRKCRENHLEECPRRQVDCKHCGDKMIFNDLMRHELLL
CSKFPVSCALCGQHGIIREEIPQHVDITGGDCPNTMIPCTFQHLGCQITVRRCEMNIHCQ
EASSHHLMLLSNTVLSQKSQLDNAKRELNETKMKYNDLSNKYKAIKKELLDKDCIMNAQT
EKLDFLENTNLNGRLLWKMELAEKDGGGHLISPSFYTGCPGYKLSIQVELSAYVGRNETY
SSLFVVLEKGRYDEKVQFPFSATCRVTVYDQDGCQNTSKKDFTTDILCSEVAMAPDNGCN
ENQKRGRLMFMMTSKLTSGQYARDGNVYMNIEVLPASRTITRL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgaaattagaaggaacaacgttggacaaaaccggaaacaaaagaaagagccc
aatcaaggctatgatgcagagtttattcccgagctagaaaagaaatatacctgtccagta
tgtctagtggctatgagggatcctgttcaaaccaaatgtgggcatagattttgtaagccc
tgtatgaaaggagtctgtgggaacaaaagatatgtaaaatgtccagttgataacacgtgg
ttcgatagtattggtgacgtgtttgatgatattgctacaagaagagaagtattgtcacta
ttagtgttgtgcaattatcaaccaaatggatgtgaatggaaaggtgaactaagagaattg
caggaacacaattcaatttgtccgtttgagaagttgacctgcccaaacagttgcagtgaa
caattctttagaaagtgtagagagaaccatttagaagaatgcccgagacgacaggtagat
tgtaaacactgtggagacaaaatgatattcaatgatttgatgagacacgagttattactg
tgctcaaagttcccagtcagctgtgcactatgtggtcagcatggaataataagagaagag
attcctcaacacgtcgacattactggaggtgattgtccaaacacgatgattccctgtaca
tttcaacatttaggatgccaaattactgtgagaaggtgcgagatgaacatccattgtcaa
gaagcttcaagtcatcacttaatgttattatcaaatacagtactgagccagaaatcacaa
ctagataacgccaaaagagaactcaatgaaactaagatgaaatataatgatttatcaaat
aaatacaaagcaattaaaaaagagctgttggacaaagactgtattatgaatgcgcaaact
gaaaaattggacttcctcgaaaacacgaacttgaatggaaggttgctttggaagatggaa
ttagctgaaaaagatggcggcggccatttaatcagcccatctttctatactggttgtccg
ggatacaaacttagtatacaggttgaactaagtgcttacgtgggacgaaatgaaacttat
tcgtcgttatttgtagttcttgagaaaggacgatacgatgaaaaagtgcagtttccattc
agcgcaacatgtagggttacagtgtacgaccaagatggctgccaaaatacatcaaagaaa
gatttcacaaccgatatcctctgtagtgaggttgccatggcacctgataatgggtgtaat
gaaaaccaaaaaagaggaagattaatgttcatgatgaccagtaaactgaccagtggccag
tatgcacgtgatggaaatgtatatatgaatatagaagtccttccggcttctcgtactata
actagattatga
DBGET
integrated database retrieval system
