Saccoglossus kowalevskii (acorn worm): 102804654
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Entry
102804654 CDS
T04123
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04120
Ubiquitin mediated proteolysis
sko04140
Autophagy - animal
sko04144
Endocytosis
sko04517
IgSF CAM signaling
sko04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102804654
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102804654
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102804654
04140 Autophagy - animal
102804654
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102804654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sko04131
]
102804654
04121 Ubiquitin system [BR:
sko04121
]
102804654
Enzymes [BR:
sko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102804654
Membrane trafficking [BR:
sko04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
102804654
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
102804654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-TRAF
TRAF-mep_MATH
MATH_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
TRAF3_RING
zf-C3HC4_3
RING_XB3-XBAT31
zf-Nse
zf-RING_5
Sina_ZnF
Alkyl_sulf_C
Motif
Other DBs
NCBI-GeneID:
102804654
NCBI-ProteinID:
XP_006813662
UniProt:
A0ABM0M0X1
LinkDB
All DBs
Position
Un
AA seq
463 aa
AA seq
DB search
MASEIRRNNVGQNRKQKKEPNQGYDAEFIPELEKKYTCPVCLVAMRDPVQTKCGHRFCKP
CMKGVCGNKRYVKCPVDNTWFDSIGDVFDDIATRREVLSLLVLCNYQPNGCEWKGELREL
QEHNSICPFEKLTCPNSCSEQFFRKCRENHLEECPRRQVDCKHCGDKMIFNDLMRHELLL
CSKFPVSCALCGQHGIIREEIPQHVDITGGDCPNTMIPCTFQHLGCQITVRRCEMNIHCQ
EASSHHLMLLSNTVLSQKSQLDNAKRELNETKMKYNDLSNKYKAIKKELLDKDCIMNAQT
EKLDFLENTNLNGRLLWKMELAEKDGGGHLISPSFYTGCPGYKLSIQVELSAYVGRNETY
SSLFVVLEKGRYDEKVQFPFSATCRVTVYDQDGCQNTSKKDFTTDILCSEVAMAPDNGCN
ENQKRGRLMFMMTSKLTSGQYARDGNVYMNIEVLPASRTITRL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgaaattagaaggaacaacgttggacaaaaccggaaacaaaagaaagagccc
aatcaaggctatgatgcagagtttattcccgagctagaaaagaaatatacctgtccagta
tgtctagtggctatgagggatcctgttcaaaccaaatgtgggcatagattttgtaagccc
tgtatgaaaggagtctgtgggaacaaaagatatgtaaaatgtccagttgataacacgtgg
ttcgatagtattggtgacgtgtttgatgatattgctacaagaagagaagtattgtcacta
ttagtgttgtgcaattatcaaccaaatggatgtgaatggaaaggtgaactaagagaattg
caggaacacaattcaatttgtccgtttgagaagttgacctgcccaaacagttgcagtgaa
caattctttagaaagtgtagagagaaccatttagaagaatgcccgagacgacaggtagat
tgtaaacactgtggagacaaaatgatattcaatgatttgatgagacacgagttattactg
tgctcaaagttcccagtcagctgtgcactatgtggtcagcatggaataataagagaagag
attcctcaacacgtcgacattactggaggtgattgtccaaacacgatgattccctgtaca
tttcaacatttaggatgccaaattactgtgagaaggtgcgagatgaacatccattgtcaa
gaagcttcaagtcatcacttaatgttattatcaaatacagtactgagccagaaatcacaa
ctagataacgccaaaagagaactcaatgaaactaagatgaaatataatgatttatcaaat
aaatacaaagcaattaaaaaagagctgttggacaaagactgtattatgaatgcgcaaact
gaaaaattggacttcctcgaaaacacgaacttgaatggaaggttgctttggaagatggaa
ttagctgaaaaagatggcggcggccatttaatcagcccatctttctatactggttgtccg
ggatacaaacttagtatacaggttgaactaagtgcttacgtgggacgaaatgaaacttat
tcgtcgttatttgtagttcttgagaaaggacgatacgatgaaaaagtgcagtttccattc
agcgcaacatgtagggttacagtgtacgaccaagatggctgccaaaatacatcaaagaaa
gatttcacaaccgatatcctctgtagtgaggttgccatggcacctgataatgggtgtaat
gaaaaccaaaaaagaggaagattaatgttcatgatgaccagtaaactgaccagtggccag
tatgcacgtgatggaaatgtatatatgaatatagaagtccttccggcttctcgtactata
actagattatga
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