Sphingomonas koreensis: BRX40_08460
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Entry
BRX40_08460 CDS
T04828
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
skr
Sphingomonas koreensis
Pathway
skr00020
Citrate cycle (TCA cycle)
skr00785
Lipoic acid metabolism
skr01100
Metabolic pathways
skr01110
Biosynthesis of secondary metabolites
skr01120
Microbial metabolism in diverse environments
skr01200
Carbon metabolism
skr01210
2-Oxocarboxylic acid metabolism
Module
skr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
skr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BRX40_08460
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BRX40_08460
Enzymes [BR:
skr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
BRX40_08460
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
OxoGdeHyase_C
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
APR52460
UniProt:
A0A1L6JAC5
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All DBs
Position
complement(1726609..1729578)
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AA seq
989 aa
AA seq
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MVGAESLDFADIAGGVSPAFVETLYAKWKADPASVEAGWREWFDGLEGTVNGPSWERANW
PLSDTDALTAALDPTQMEPAPKPARGGASPAPAAAPAASSADIARAANDSIRAMLLIRTY
RVRGHLAANLDPLGLSHQNLPADLTPEYHGFTAADLDRPIYLGGTMGLEKATIRELVEIL
RRNYCGNVGLEYMHIADVEERRFLQERMEGKDKAIEFTPEGKKAILSKVIEAEQWEKFLG
RKYVGTKRFGLDGGESMIPAMEAIIKYGGAQGVREIVYGMAHRGRLNMLGTVMAKPYRVI
FHEFAGGSANPDDIGGSGDVKYHLGTSTDREFDGVSVHMSLVANPSHLEAVDPVVLGKVR
AQQTNRNDLEDHEQVLPVLIHGDAAFAGQGIVWECLGFSGIRGYNTGGCIHFIINNQIGF
TTSPQFARSSPYPSDVAKGVQAPIFHVNGDDPEAVTFACKMAIEFRQTFKRDIVIDMWCY
RRFGHNEGDEPSFTQPLMYAKIKGHPGVSDIYAKRLEGEGVIDGEFAKAQAAAFTAHLED
EFTAGASYKANKADWFGGRWQGLGAPMDAETARRNVETGIDKKLFDSLGRTLTTIPDGLT
PHKTLNRVLDAKAAMFKSGENFDWATGEALAFGSLLSEGYGVRLSGQDSGRGTFSQRHAV
WVDQTDEHKYVPLNEIPHGRFEVLDSPLSEYGVLGFEYGYALADPKTLVLWEAQFGDFVN
GAQIMIDQFIAAGEAKWLRANGLVMLLPHGYEGQGPEHSSARPERFLQLCAGDNMQVANV
TTPANYFHLLRRQMHRNFRKPLIVMTPKSLLRHKLAVSKTEDFLGDTHFKRILSDPSAPA
DKDVKRVVLCSGKVAYDLIEARDAAGDTTTAIIRIEQLYPFPGEPLVARLARMTNVEEVV
WAQEEPKNNGYWFFVEPYIEACMVESGIEPQRPRYAGRAAAASPATGLMKRHQAEQGALV
ADALGHNVREEIRRARKTEDKKTAGKAGA
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgctgaaagcctggatttcgcagacatcgccggtggcgtgagcccggcgttc
gtcgagacgctctacgccaagtggaaggcggaccccgcgtccgtcgaagccggatggcgc
gagtggttcgacgggctcgaaggcaccgtcaacggcccgagctgggagcgtgccaactgg
ccgctcagcgacaccgacgcgctcaccgcggcgctcgatccgacccagatggagccggcg
cccaagcccgcgcgcggcggcgcttcccccgccccggccgcggcgcccgcggcctcgtcg
gccgacatcgcgcgcgccgcgaacgattcgatccgcgccatgctgctcatccgcacctat
cgcgtgcgcgggcatcttgccgccaatctcgacccgctgggcctgtcgcaccagaacctg
cccgccgacctgacgcccgaatatcacggcttcactgccgctgatctcgatcgtccgatc
tatctcggcggcacgatggggctggagaaggcgacgatccgcgagctggtcgagatcctg
cgccgcaattattgcggcaatgtcggcctcgaatacatgcacatcgccgatgtcgaggaa
cgccgcttcctgcaggagcgcatggagggcaaggacaaggcgatcgagttcacgcccgaa
ggcaagaaggcgatcctgtccaaggtgatcgaagccgagcagtgggagaagttcctgggc
cgcaaatatgtcggcaccaagcgcttcggcctcgacggcggcgaatcgatgatcccggcg
atggaagcgatcatcaaatatggcggcgcgcagggcgtgcgcgagatcgtctatggcatg
gcgcatcgcggccggctcaacatgctcggcacggtgatggccaagccctatcgcgtcatc
ttccacgaattcgccggcggctcggccaaccccgacgacatcggcggctcgggcgacgtc
aaatatcacctcggcaccagcaccgaccgcgagttcgacggcgtcagcgttcacatgtcg
ctggtcgccaacccctcgcacctcgaggcggtggacccggtggtgctcggcaaggtccgt
gcgcagcagaccaaccgcaacgaccttgaggatcacgagcaggtcctgcccgtgctgatc
catggcgatgcggccttcgcaggccagggcatcgtgtgggagtgcctcggcttctcgggc
atccgcggctacaacaccggcggctgcatccacttcatcatcaacaaccagatcggcttc
acgaccagcccgcaattcgcgcgctcgtcgccctatccgtccgacgtcgccaagggcgtc
caggcgccgatcttccacgtcaacggcgacgatcccgaagccgtgaccttcgcgtgcaag
atggcgatcgagttccgccagaccttcaagcgcgacatcgtcatcgacatgtggtgctat
cgccgcttcggccataacgaaggcgacgagccctcgttcacccagccgctgatgtacgcg
aagatcaagggtcaccccggcgtcagcgacatctatgccaagcggcttgagggcgaaggc
gtcatcgacggcgagttcgccaaggcccaggcggccgccttcactgcccatctcgaggac
gagttcaccgcgggcgcgagctataaggcgaacaaggccgactggttcggtggccgctgg
cagggcctcggcgcgccgatggacgccgaaaccgcgcgccgcaacgtcgagaccggcatc
gacaagaagctgttcgacagcctcggccgcacgctgacgacgatcccggacggcctgacc
ccgcacaagacgctcaaccgcgtgctcgacgccaaggccgcgatgttcaagtcgggtgag
aatttcgactgggcaaccggcgaggcgctggccttcggctcgctgctgtcggaaggctat
ggcgtgcgcctgtcgggccaggattcgggccgcggcacgttcagccagcgtcatgccgtc
tgggtcgaccagaccgacgagcacaaatatgtgccgctgaacgagattccgcacggccgg
ttcgaggtgctcgacagccccttgagcgaatatggcgtgctcggtttcgagtacggctat
gcgctcgccgaccccaagacgctggtgctgtgggaggcgcagttcggcgacttcgtcaac
ggcgcgcagatcatgatcgaccagttcattgccgcgggcgaggccaagtggctgcgcgcc
aacggcctcgtgatgctgctgccgcacggctatgagggtcagggccccgagcacagctcg
gcgcgtccggagcgtttcctccagctgtgcgcgggcgacaacatgcaggtcgcgaacgtg
accacgcccgccaactacttccacctgctgcgccggcagatgcaccgcaacttccgcaag
ccgctcatcgtcatgacgccgaagtcgctgctccggcacaagctggcggtcagcaagacc
gaggatttcctgggcgatacgcatttcaagcgcatcctctcggacccgtcagcgccggcg
gacaaggatgtgaagcgcgtggtgctttgctccggcaaggtcgcctatgacctgatcgag
gcacgcgacgcggcgggcgacacgaccaccgcgatcattcgtatcgagcagctctacccc
ttccccggcgaaccgctggtcgcacgcctcgcgcgcatgaccaatgtcgaggaagtggtg
tgggcgcaggaggagccgaagaacaacggctactggttcttcgtcgaaccctatatcgag
gcgtgcatggtcgaatcgggcatcgagccgcagcgcccgcgctatgcgggccgcgccgcg
gcggcatcgcccgccaccggcctgatgaagcgccaccaggccgagcagggcgcgcttgtc
gccgacgcactgggccataatgtgcgcgaggaaatccgccgcgcgcgcaagaccgaagac
aagaagaccgccggcaaggccggcgcgtga
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