Skermanella cutis: IGS68_06520
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Entry
IGS68_06520 CDS
T07020
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
skt
Skermanella cutis
Pathway
skt01501
beta-Lactam resistance
skt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IGS68_06520
01503 Cationic antimicrobial peptide (CAMP) resistance
IGS68_06520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skt02000
]
IGS68_06520
01504 Antimicrobial resistance genes [BR:
skt01504
]
IGS68_06520
Transporters [BR:
skt02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IGS68_06520
Antimicrobial resistance genes [BR:
skt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IGS68_06520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QQP90875
LinkDB
All DBs
Position
1407157..1410228
Genome browser
AA seq
1023 aa
AA seq
DB search
MQISELSVRRPVLATVMSLTVLLIGIVAYQRLAVREYPKIDEPVVTVTTKYQGASAEIVE
SQVTQPLEESLSGIEGIDVMSSISRSETSQITVRFRITRDPDVAANDVRDRVGRVRGSLP
DEIDEPVIAKVEADAQPIIYLAFSSDRNTPLEVTDYADRFVKDRLQNLPGVADVRIFGER
KYAMRIWLDPTRMAAYKVTPQDVETALRRQNIEIPAGRVESAQREFTVVSETDMRTPAEF
ENVILRDESGYLVRLRDVGRAELGARDERVNARFNGRNAVAMGVVKQSTANPLEVSGAVQ
RTLPVIRAGLPEGMSVDIGYDSSVFIAESIDAVFHTILEAIVLVVLVIFFFLRSLRATLI
PLVTIPVSLIGAFAIMYVFDFSINTLTLLAMVLAIGLVVDDAIVMLENIYRHVEEGMPPF
RAAIQGSREIGFAVVAMTITLAAVYAPIGFQTGRTGRLFTEFALTLAGAVLVSGFVALTL
SPMMCSKLLKHQTRHGFFYNAIEALLNGLTNGYRWLLRVSLKARPLILLVGIGVAAASYV
LFGQIKSELAPTEDRGTIVGIIIAPEGSTIQYTDRYARAIEGFIKQVPVVEKFFMVVGFP
VVNQGITFVRLTDWDDREIKQQEVVQQLAPKFFGVPGTLAFPANPPSLGQSPTEKPIQFV
IQTSLPYSELQGMVDRMLAEARTNPGLVNVDTDLKLNKPELKISLDRDKAADLGLEIDTI
GRTLETLLGGRQVTRFKQNGKQYDVVVQVADVDRTNPDDIARIYVRGKQGEMVSLANLLK
VEERVSPKELNHFNKLRSATITATLGPNYTLGEGLAFLTAAAERSLPAAAQVDYAGQSRE
FRESSSSLYVTFVLALAFIYLVLAAQFESFVDPFVIMLTVPLSMTGALLALKLTGATMNV
YSQIGLVTLVGLITKHGILIVEFANQLQRQGVEVRDAVVRSAVLRLRPILMTTGAMVLGA
VPLALATGAGAESRQAIGAVIVGGMLLGTLLTLFVVPTVYTYIARKKPFEHSVPAGAQPH
PAE
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctccgaactcagcgtccgccgcccggtgctcgccacggtcatgagcctgacc
gtgctgctgatcggcatcgtcgcctaccagcggctggcggtgcgcgaatatcccaagatc
gacgagccggtggtcaccgtgaccaccaagtaccagggcgccagcgcggagatcgtcgag
agccaggtcacccagccgctggaggagagcctgtccggcatcgagggcatcgacgtgatg
tcctccatcagccggtcggagaccagccagatcaccgtccgcttccggatcacccgggac
cccgacgtggcggccaacgacgtgcgcgaccgggtcggccgggtgcgcggctcgctgccg
gacgagatcgacgagccggtgatcgccaaggtcgaggccgacgcccagccgatcatctac
ctggccttttccagcgaccggaacaccccgctggaggtgaccgactatgccgaccggttc
gtcaaggaccggcttcagaacctgcccggcgtcgccgacgtccggatcttcggcgagcgc
aagtacgccatgcggatctggctcgacccgacgcgcatggccgcctacaaggtcaccccc
caggacgtcgagacggcgctgcgccggcagaacatcgagatcccggccggtcgggtggag
agcgcccagcgcgagttcaccgtcgtgtccgagaccgacatgcggacgccggcagagttc
gagaacgttatcctgcgggacgagtcgggctatctggtccggctgcgcgacgtcggccgg
gcggagctgggcgcccgggacgagcgggtcaacgcccggttcaacgggcgcaacgccgtg
gccatgggcgtcgtcaagcagtccaccgcgaacccgctcgaggtctccggggcggtgcag
cggacgctgccggtgatccgcgccggcctgccggaaggtatgagcgtcgatatcggctac
gacagctccgtcttcatcgcggaatcgatcgacgccgtgttccacacgatcctggaggcg
atcgtgctggtcgtcctggtgatcttcttcttcctgcgctcgctgcgcgcgaccctgatc
ccgctggtcacgatcccggtgtccctgatcggcgccttcgcgatcatgtacgtgttcgac
ttcagcatcaacacgctgaccctgctggccatggtgctggcgatcgggctggtggtggac
gacgcgatcgtcatgctggagaacatctaccgccacgtggaagaagggatgcccccgttc
cgcgcggcgatccagggctcccgcgagatcgggttcgccgtcgtcgcgatgaccatcacg
ctggcggcggtgtacgctccgatcggctttcagaccgggcgtacgggacggctcttcacc
gagttcgcgctgaccctggcgggcgccgtgctggtctcgggcttcgtggcgctgaccctg
tcgccgatgatgtgctccaagctgctgaagcaccagacgcgccacggcttcttctacaac
gcgatcgaggcgctgctgaacggcctgaccaacggctaccgctggctgctccgcgtctcg
ctgaaggcccggccgctgatcctgctggtcgggatcggcgtcgccgcggccagctacgtc
ctgttcgggcagatcaagtcggagctggccccgaccgaggaccgcggcaccatcgtcggg
atcatcatcgccccggaaggatcgaccatccagtacaccgaccgctatgcccgggcgatc
gaaggcttcatcaagcaggtcccggtggtcgagaagttcttcatggtcgtgggcttcccg
gtggtcaaccagggcatcaccttcgtccggctgaccgactgggacgaccgcgagatcaag
cagcaggaggtcgtccagcagctcgcgccgaaattcttcggcgttcccggcaccctggcg
ttcccggccaacccgccctcgctgggccagagcccgaccgagaagccgatccagttcgtc
atccagacctcgcttccctattccgagctccagggcatggtcgacaggatgctggcggag
gcgcggaccaacccgggtctggtcaacgtcgacaccgacctgaagctgaacaagccggaa
ctcaagatctcgctcgaccgcgacaaggcggccgacctggggctggagatcgataccatc
ggccgcacgctggaaaccctgctgggcggccggcaggtcacccggttcaagcagaacggc
aagcagtacgacgtggtggtccaggtcgccgacgtggaccggaccaacccggacgacatc
gcccggatctatgtgcgcggcaagcagggcgagatggtcagcctcgccaacctgctcaag
gtcgaggaacgggtctcgccgaaggagctgaaccatttcaacaagctgcgctcggccacg
atcaccgcgaccctggggccgaactataccctgggggaggggctggccttcctgaccgcg
gccgccgaacggtcgctgccggcggcggcccaggtcgactatgccgggcagagccgggag
ttccgcgagtcgagcagcagcctctacgtcaccttcgtgctggcgctggccttcatatac
ctcgtgctggcggcccagttcgagagcttcgtcgatcccttcgtgatcatgctgacggtg
ccgctgtccatgaccggcgccttgctggcgctgaagctgaccggggccaccatgaacgtc
tacagccagatcgggctggtgaccctggtcggcctgatcaccaagcacggcatcctgatc
gtcgagttcgccaaccagctccagcgccagggggtggaggtgcgcgacgccgtcgtccgc
tccgctgtgctgcgcctgcggccgatcctgatgacgacgggcgccatggtgcttggcgcg
gttccgctggccctggcgaccggcgccggggcggaaagccggcaggcgatcggcgcggtg
atcgtcggcggcatgctgctgggaaccctgctgacgctgttcgtcgtgccgacggtctat
acctacatcgcgcgcaagaagccgttcgagcattcggtgccggccggcgcccagccgcat
ccggcggagtag
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integrated database retrieval system
