Skermanella cutis: IGS68_21025
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Entry
IGS68_21025 CDS
T07020
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
skt
Skermanella cutis
Pathway
skt01501
beta-Lactam resistance
skt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IGS68_21025
01503 Cationic antimicrobial peptide (CAMP) resistance
IGS68_21025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
skt03036
]
IGS68_21025
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skt02000
]
IGS68_21025
01504 Antimicrobial resistance genes [BR:
skt01504
]
IGS68_21025
Chromosome and associated proteins [BR:
skt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IGS68_21025
Transporters [BR:
skt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IGS68_21025
Antimicrobial resistance genes [BR:
skt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IGS68_21025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
QQP88496
LinkDB
All DBs
Position
4511850..4513067
Genome browser
AA seq
405 aa
AA seq
DB search
MNSLPSPPPDARAPNRGPRRRGVVRAFLAPLLAGAGLLLLAACGDGGEQAQDNAQQQPPQ
AVPVGVFEVRPEPVTLGETFVGRIEAIQRVELRARVTGFLEERLFREGETVEQGKPLFRI
EPQIYEAVVEQRRADLARAEAEQENATVQLRRAQELVQRNNIPEATVDERQAAARTAEAG
VLQARAALRQAEIDLGYTEIRAPIAGRIGQALFDVGDLVNPESGALAELVTQDPIHVLFQ
VSQRTLLEAQRAAGSQGLDPNRFVVRVLLPDGSEYQHQGRVNFVGITVSQQTDTVPVRAE
VPNTDGLLRDGQFVRVLIQPDEPELAITIPQAAVQADQQGNFVLGVDGENTVRIQRVETG
ETLDQGRVVVRSGLQEGDRVVIQGIQQVRPGAPVTPSPVDADQGA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaattccttgccgtccccgccgcccgatgcgcgtgccccgaatcgcggaccgcgccgc
cggggcgtcgtccgggccttcctcgccccgctcctggccggtgccggcctgctgctgctc
gcggcctgcggcgacggcggcgagcaggctcaggacaatgcccagcagcaaccgccgcag
gcggttcccgtcggcgtcttcgaggtcaggcccgagcccgtgaccctgggcgagaccttc
gtcggccggatcgaggcgatccagcgggtggaactgagggcacgggtcaccggcttcctg
gaggagcggctgttccgcgagggcgagaccgtcgaacagggcaagccgctgttccggatc
gaacctcagatctacgaagcggtcgtcgagcagcgccgcgccgacctggcccgcgccgag
gccgagcaggagaacgcgacggtccagctccgccgcgcccaggaactggtccagcgcaac
aatatcccggaagccaccgtggacgagcgacaggccgccgcccgcaccgcggaagccggc
gtcctccaggcgagggcggcgctgcgccaagcggaaatcgacctcggctacaccgagatc
cgggcgccgatcgccgggcggatcggacaggccctgttcgacgtcggcgacctggtgaac
ccggaatcgggcgccctggccgaactggtgacccaggatcccatccatgtcctgttccag
gtcagccagcgcaccctgctcgaagcccagcgggcggcgggatcgcagggcctggacccc
aaccgcttcgtcgtccgggtgctgctgcccgacggcagcgagtaccagcaccagggcagg
gtgaatttcgtcggcatcacggtcagccagcagacggacacggtgcccgtccgcgccgag
gtgccgaataccgacggtctgctgcgcgacggccagttcgtccgcgtcctgatccagccg
gacgaacccgagctggccatcacgattccccaggccgccgtccaggccgaccagcagggc
aacttcgtgctgggcgtcgacggcgagaacacggtgcggatccagcgggtggaaaccgga
gagaccctcgaccagggccgggtcgtcgtccgatccggcctgcaggagggcgaccgggtg
gtcatccagggcatccagcaggtccgtcccggcgcacccgtgactcccagcccggtcgac
gccgaccagggagcgtga
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