Skermanella cutis: IGS68_21030
Help
Entry
IGS68_21030 CDS
T07020
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
skt
Skermanella cutis
Pathway
skt01501
beta-Lactam resistance
skt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IGS68_21030
01503 Cationic antimicrobial peptide (CAMP) resistance
IGS68_21030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skt02000
]
IGS68_21030
01504 Antimicrobial resistance genes [BR:
skt01504
]
IGS68_21030
Transporters [BR:
skt02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IGS68_21030
Antimicrobial resistance genes [BR:
skt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IGS68_21030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QQP88497
LinkDB
All DBs
Position
4513071..4516220
Genome browser
AA seq
1049 aa
AA seq
DB search
MLSSVFIDRPRLAMVISIVIVLAGLLALTRIPVAQFPDIVPPQVSVTTLYPGANAETVEA
TIAQPIESQVNGVQDMIYMSSTSGNDGSYTLTVTFAVGTDPDINTVNVQNRVRLAEASLP
EEVARQGVQVRQQSSAFLQLISLVSESPEYDELFLNNYARINLLDEISRVSGVGEARLFS
EYDYSMRVWLETDRLTSFGLSPNDVVAAIRSQNVQAAVGQLGAQPQPNGQQLEFSLQAAG
RLTDVAQFENIVLRADADGSLLRLSDVARVELAARSYSSAGTSNGRPAAVLGIYQAPGAN
AVTTAQEVLRVLDRLKERFPEGVLYEVTYDTTVFVTASIEEVVTTLVEAFVLVLVVVFVF
LGNWRATIIPMLAVPVALIGTFAFLLLFGQSANTISLFAMVLAIGIVVDDAIVVVENVER
VMRDENLPAPEATRKAMGQITPAIIAITLVLLSVFIPVGFIPGITGSLYAQFALTVSVAM
LLSAVNALTLSPALCALLLKPHEKHGRVMGWIQDRIDNVRNGYSRLVNRLVRMAILSLVV
VAAAFGGYFGLSTIVPAGFLPDEDQGALFMELRLPQNAALNRTQVVVRDVEGLVRDIPGV
RSVTAVAGFSLLDSLQAGNAAFMVVLLDPFEERTEAGTTAFDVLAQIRQRTATVPNAQIL
AFNLPPISGLGNTAGFDFRLQDLTGGEPAQLAAAAGGLVVAANQDPALAQVFTTYRVDTR
RLFVEVDREKAQALGVQVSDVYNALQTTLGGFYVNDFNRFGRTWQVNVQAEAKDRDQVED
LWRIHVRSADGAMVPLRSLASVRFQLGPQAINRYNNYRSVAIQGSPAPGYSSGGALSAMA
SVADNTLPPGFSFAWSGISLQEQEAAGQTPIILALAVLFAYLFLVALYESWTIPIAVLLS
VSVGLCGAMLALMATGLANDVYAQIGIVVLIALASKNAILIVEFAKEQREAGASIRDAAR
EGARLRFRAVIMTSLAFIFGLIPLVTAVGAAAASRRGVSTAVFGGMIAASSLGLFVIPML
YVVIQGMREWTTRRVRGQPRRPESPAPAE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgctctcctccgtcttcatcgaccggccccgcttggcgatggtcatctccatcgtgatc
gtcctggcgggcctgctggccctcacccgcatcccggtggcgcagttccccgacatcgtg
ccgccccaggtcagcgtcacgacgctctatcccggcgccaacgccgagacggtggaggcg
acgatcgcccagccgatcgagagccaggtgaacggcgtccaggacatgatctacatgagt
tcgaccagcggcaacgacggcagctacacgctgaccgtcaccttcgccgtcggcacggac
ccggacatcaacacggtcaacgtccagaaccgggtgcgcctggccgaggcgtcgctgccc
gaagaggtcgcacgccagggcgtccaggtgcgccagcagtcctcggccttcctccagctg
atcagcctggtgtcggaatcgcccgagtacgacgagctgttcctgaacaactacgcccgc
ataaacctgctggacgagatctcccgcgtgtccggcgtgggcgaggcgcggctgttcagc
gagtatgactacagcatgcgggtctggctggagacggaccgcctgaccagcttcggcctg
tcgcccaacgacgtggtcgccgcgatccggtcccagaacgtccaggccgcggtcgggcag
ctcggcgcccagccgcagccgaacggacagcagctggaattctcgctccaggcggcgggc
cggctcaccgacgtcgcgcagttcgagaacatcgtcctccgggccgacgcggacggatcg
ctgctgcggctcagcgacgtggcgcgggtcgagctggcggcccgctcctactcctccgcc
ggaacctccaacggccggccggcggccgtgctcggcatctaccaggcgccgggggccaac
gccgtcaccaccgcccaggaggtgctgcgggtgctggaccggctgaaggagcgctttccc
gagggcgtcctctacgaggtgacctacgacaccaccgtattcgtgaccgcctccatcgag
gaggtggtcaccacgctggtcgaggccttcgtgctggtcctggtggtcgtcttcgtgttc
ctgggcaactggcgggcgacgatcatccccatgctggcggtgccggtggccctgatcggc
accttcgcgttcctgctgctgttcggccaatcggcgaacacgatctccctgttcgccatg
gtgctggcgatcggcatcgtggtggacgacgcgatcgtggtggtggagaacgtcgagcgc
gtgatgcgcgacgagaacctgccggcgccggaggcgacccgaaaggcgatgggccagatc
accccggcgatcatcgcgatcacgctggtcctgctgtccgtcttcatccccgtgggcttc
atccccggcatcaccggctcgctctacgcccagttcgcgctgaccgtctcggtcgcgatg
ctgctgtcggcggtcaacgccctgaccctcagcccggccctctgcgcgctgctgctgaag
ccgcacgagaagcacggccgggtcatgggctggatccaggaccgcatcgacaatgtccgg
aacggctattcccgcctggtcaaccggctggtgcggatggcgatcctgtcgctggtcgtg
gtcgcggcggcgttcggcggctatttcggcctttccaccatcgtgcccgcgggattcctg
ccggacgaggaccagggcgccctgttcatggaactgcggctgccgcagaacgcggcgctc
aaccgcacgcaggtcgtggtgcgcgacgtggaagggctcgtccgcgacatccccggcgtg
cgcagcgtcaccgcggtggcgggcttcagccttctggacagcctccaggccggcaacgcc
gccttcatggtggtgctgctcgacccgttcgaggagcggaccgaggcggggaccaccgcc
ttcgacgtgctggcccagatccggcagcgcacggcgaccgtgcccaacgcccagatcctg
gccttcaacctgccgccgatctcgggcctcggcaacaccgccgggttcgacttccggctc
caggacctgaccggcggcgagccggcccagctggcggcggccgccggcgggctggtggtc
gcggccaaccaggatcccgccctggcccaggtcttcacgacctaccgggtggatacccgc
cgcctgttcgtcgaggtcgaccgggagaaggcgcaggcgctgggggtccaggtcagcgac
gtctacaacgcgctccagaccacgctgggcggcttctacgtcaacgacttcaaccggttc
ggacgcacctggcaggtcaatgtccaggccgaggcgaaggaccgcgaccaggtggaagac
ctctggcgcatccatgtccgaagcgccgacggggccatggtgccgctccgcagcctcgcc
tcggtccggttccagctggggccgcaggcgatcaaccgttacaacaactaccgcagcgtc
gccatccagggatcgccggcgccgggatacagctccggcggcgcgctgtccgccatggcg
tcggtcgcggacaataccctgccgccgggcttctccttcgcctggtcgggcatctcgctc
caggagcaggaagcggcgggacagacgcccatcatcctggcgctggccgtcctgttcgcc
tacctgttcctggtggcgctgtacgagagctggacgatcccgatcgcggtcctcctctcg
gtctcggtcggcttgtgcggcgccatgctggcgctgatggcgacggggctggcgaacgac
gtctatgcccagatcggcatcgtggtgctgatcgcgctcgccagcaagaacgctatcctg
atcgtcgagttcgccaaggagcagcgcgaggccggcgcctcgatccgggacgccgcccgg
gaaggggcgcggctccgcttccgggcggtgatcatgaccagcctcgccttcatcttcggc
ctgatcccgctcgtgaccgccgtcggcgccgccgcggcgagccggcgcggcgtctccacg
gcggtgttcggcggcatgatcgcggcatcgagcctgggcctgttcgtcatacccatgctc
tacgtcgtgatccagggcatgcgggaatggacgacccgccgcgtccgcggccagccccgc
cggccggagtcccccgccccggcggagtga
DBGET
integrated database retrieval system
