Skermanella cutis: IGS68_23290
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Entry
IGS68_23290 CDS
T07020
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
skt
Skermanella cutis
Pathway
skt01501
beta-Lactam resistance
skt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IGS68_23290
01503 Cationic antimicrobial peptide (CAMP) resistance
IGS68_23290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
skt03036
]
IGS68_23290
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skt02000
]
IGS68_23290
01504 Antimicrobial resistance genes [BR:
skt01504
]
IGS68_23290
Chromosome and associated proteins [BR:
skt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IGS68_23290
Transporters [BR:
skt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IGS68_23290
Antimicrobial resistance genes [BR:
skt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IGS68_23290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
YknX_C
HH_AAEA_pHBA
HH_CyaD
Beta-barrel_RND_2
BSH_CzcB
HH_AprE
ATG14
HH_EMRA
DRY_EERY
Motif
Other DBs
NCBI-ProteinID:
QQP88903
UniProt:
A0ABX7B3I4
LinkDB
All DBs
Position
4997509..4998660
Genome browser
AA seq
383 aa
AA seq
DB search
MLFLATGCDGTGAVAQQGGGQGRPPAEVGVVTLQPQSVDVTTELPGRTTAARLAEVRPQV
NGIILKRLFEEGAEVKAGQQLYQIDPAPYQASLDTAKAELQRAEAAAKSARTKAARYRDL
VKSRAVSQQDYDDIAATLLENEAQVASAKAAIRTAQINLDYTKVASPISGRIGRSTVTEG
ALVTANQTQALATVTQLDPIYVDVTQSSAEMFRLRQAVGRGAIQSVEGKAPVTLLVGGSN
DAPYPHRGELQFSEVSVDESTGSVRLRAVFPNPNQDLLPGLFVRAKVNWGAAENVFMVPQ
QAVVRRPDGSAFVWAVGPDGKAAQKTVNAERAIGDKWLVTQGVAPGDRVVVEGIQKVAPG
AQVNAVALDAGQPGAVAQAEEAR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctttttctcgcgacggggtgtgatggcacgggcgccgtcgcccaacaggggggcggc
cagggccgcccgccggcggaggtgggtgtcgtcacgctgcagccgcaatcggtcgacgtc
acgacggaactgccgggacgaaccacggcggcgcgcctggccgaggtcaggccgcaggtc
aacgggatcatcctgaagcgcctgttcgaggaaggcgcggaagtcaaggcggggcagcag
ctctaccagatcgaccccgctccctaccaggcgtcgctcgacaccgccaaggccgagctt
cagcgcgccgaagcggcggccaagtcggcccggaccaaggcggcccgctaccgcgacctg
gtcaagtcgcgcgccgtcagccagcaggattacgacgacatcgccgcgaccctgctggag
aacgaggcccaggtcgcctccgccaaggcggcgatccggacggcccagatcaacctcgac
tacacgaaggtcgcctctccgatctccggccggatcggccgctcgaccgtgaccgagggc
gccctggtcaccgccaaccagacccaggccttggcgacggtcacccagctagacccgatc
tacgtggacgtgacccagtccagcgccgagatgttccgactgcgccaggccgtcggccgc
ggcgcgatccagagcgtcgagggcaaggcgccggtcaccctgctggtcggcggatcgaac
gacgccccctacccgcaccggggcgagctccagttctcggaggtcagcgtcgacgaatcg
accggctcggtccggctgcgcgccgtgttcccgaatccgaaccaggacctcctgccggga
ctgttcgtccgggccaaggtcaattggggcgccgccgagaacgtcttcatggtgccgcag
caggcggtggtccgccggcccgacggcagcgccttcgtctgggcggtcggtccggacggc
aaggccgcccagaagacggtgaacgcggagcgggcgatcggcgacaagtggctggtcacc
cagggcgtcgcccccggcgaccgggtcgtcgtggaaggcatccagaaggtggcgcccggc
gcccaggtcaatgcggtggcgctcgacgccggccagccgggcgcggtcgcccaggccgaa
gaagcccggtag
DBGET
integrated database retrieval system
