Sulfuricurvum kujiense: Sulku_0815
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Entry
Sulku_0815 CDS
T01370
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sku
Sulfuricurvum kujiense
Pathway
sku03030
DNA replication
sku03410
Base excision repair
sku03420
Nucleotide excision repair
sku03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sulku_0815
03410 Base excision repair
Sulku_0815
03420 Nucleotide excision repair
Sulku_0815
03430 Mismatch repair
Sulku_0815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sku03032
]
Sulku_0815
03400 DNA repair and recombination proteins [BR:
sku03400
]
Sulku_0815
Enzymes [BR:
sku01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Sulku_0815
DNA replication proteins [BR:
sku03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Sulku_0815
DNA repair and recombination proteins [BR:
sku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Sulku_0815
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sulku_0815
MMR (mismatch excision repair)
DNA ligase
Sulku_0815
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Sulku_0815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
HHH_5
PTCB-BRCT
DNA_ligase_ZBD
HHH
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
ADR33481
UniProt:
E4U1W3
LinkDB
All DBs
Position
808376..810406
Genome browser
AA seq
676 aa
AA seq
DB search
MTQTDYKNAVEQLKKYSYHYYVLDDPITTDEEYDILYHKVVAYEHEHPSEIISDSPTQRV
GDVPQDKFDKAQHLSRMWSLEDLFDREELETWVNRITKGYGDVRFYCEPKFDGASLNLIY
DKGVLVQAITRGDGVEGEDVTQNAKTIQSIPLRIEYKGRIEIRGEVVIFKEDFEKINLER
SRNGESLFANPRNAAAGSLRQLDTRITASRRLVFMPYGIGANTLEIKNLSERMEWVYGLG
FRNPHMTHLCESADQIETFYHEMRVERDNFAMLLDGMVIKVDSIAVQDELGYTVKNPRWA
AAYKFPAIEKLTTLKEVIMQVGRSGVVTPVAIVEPVDIEGVTVERSTLHNFDEIERKDIR
IGDKVIILRSGDVIPKIVKVITAERTGSEQVIPRPTQCPVCGSELLDEGALIKCQNMGCE
ARVVNSIIYFASKQCLNIDGLGDKIVEALHSAGMVHEVSDLFGLTMDQLLSLEGFKEKKS
RNLLDAIAAAKGCDCWRFINALGIEHIGEVASKTLCGAFGTAFDRSSREEILALEGFGGE
MVESILEFVRVNSEKIERLRSILNPAAPVKIEAAENPFKGKSVVITGSMSVPRDHIKVML
EELGAKVASSVSKKTDYVVYGEDAGNKYDKAVELGVTLLTESEFREMCEAGDSAPLPDIA
STPQGSAVEPKYSLFD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaaccgactataaaaacgccgtagaacaactcaaaaaatactcttaccactat
tacgtcctcgacgatccgatcacgacggacgaggagtacgatatcctctaccataaggtg
gtggcgtacgagcatgagcatccgagtgagatcatcagcgattctccgacacagcgggtc
ggggacgtgccgcaggataagtttgataaagcacagcatctcagccgcatgtggagtctc
gaagacctctttgaccgcgaggagttggagacgtgggtaaaccgtatcaccaaaggctac
ggcgatgtccgcttttactgcgaaccgaaattcgacggggcgagtctgaacctgatctac
gataaaggcgtactcgttcaggcgattacccgcggagacggggtcgagggggaagacgtt
acccaaaacgccaaaacgattcagagtatcccccttagaatcgagtacaaagggcggatc
gagatacgcggcgaagtggtcattttcaaagaggattttgagaagatcaatctcgagcgc
tcccgcaacggcgagtcgctgttcgccaacccgcgcaatgcggcggcggggagcctgaga
cagctcgatacccggattacggcgtcgcgccgtctggtatttatgccttacggcattgga
gctaataccctcgagatcaaaaacctcagtgagcggatggagtgggtctatggcctcgga
tttcgcaatccccatatgacccacttgtgcgagagcgcggatcaaatcgagaccttttac
catgagatgagggttgagagggataacttcgcgatgctgctggacgggatggtgatcaag
gtcgactcgattgcggtacaggatgaactgggctatacggtcaaaaatccccgctgggcg
gcggcgtataaattccccgccatcgagaagctcacgacactcaaagaggtgattatgcag
gtggggcgcagcggtgtcgtcactcccgtcgccatcgtcgaaccggtcgatatcgagggg
gtgacggtcgagcgttcgacattgcataatttcgacgagatcgagcgcaaagatatccgc
atcggggacaaggtgatcattctccgcagcggcgacgttatccccaaaatcgtcaaagtc
attacggcggagcggacgggaagcgagcaggtgattccacgtcctacgcagtgccccgtc
tgcggaagtgaactgctcgatgagggggcgttgatcaaatgccaaaacatgggatgcgaa
gcgcgggtggtcaactcgatcatctatttcgcctccaaacagtgccttaacatcgacgga
ttgggagacaagatcgtcgaagcgcttcatagcgcggggatggtgcatgaggtaagtgat
ctttttggcctcacaatggatcagctcctctcattggagggattcaaagagaaaaagagc
cgcaacctcctcgatgcgatcgcggcggccaaagggtgcgactgctggcgctttatcaat
gcactggggatcgagcatatcggagaagtcgcctccaaaaccctctgcggtgcgttcggt
acggcgtttgatcgctcatcccgcgaagagattctggcgttggaggggttcgggggagag
atggtcgaatcgatcctcgaatttgtccgcgtcaacagcgagaagatcgagagactccga
tcgattttaaaccctgccgctcctgttaagatcgaagcggcagagaacccgtttaaaggc
aaaagtgtcgtcattaccggatcgatgagcgtaccgcgcgatcacatcaaagtgatgtta
gaagagttgggagcaaaagtcgcttcatcagtgtcgaaaaagaccgattacgtcgtgtac
ggggaagatgcggggaataaatacgataaagcggtagagctcggtgtgacgctcctcacc
gaaagcgaatttagagaaatgtgcgaagcgggcgattcagcgccgcttcccgatattgct
tcgacgccgcaggggagcgctgtagagccaaaatatagcctttttgattaa
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