Sphaerospermopsis kisseleviana: NIES73_11940
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Entry
NIES73_11940 CDS
T10228
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
skv Sphaerospermopsis kisseleviana
Pathway
skv01501
beta-Lactam resistance
skv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
skv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIES73_11940
01503 Cationic antimicrobial peptide (CAMP) resistance
NIES73_11940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
skv03036
]
NIES73_11940
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skv02000
]
NIES73_11940
01504 Antimicrobial resistance genes [BR:
skv01504
]
NIES73_11940
Chromosome and associated proteins [BR:
skv03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NIES73_11940
Transporters [BR:
skv02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NIES73_11940
Antimicrobial resistance genes [BR:
skv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIES73_11940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
HH_EMRA
Beta-barrel_YknX
YknX_C
CzcB_C
BSH_CzcB
RND-MFP_C
BSH_CusB
Beta-barrel_AprE
Biotin_lipoyl
HH_YBHG
Beta-barrel_RND_rel
CSD2
CC_Bre1
BSH_YhbJ
BSH_Fcp1
Motif
Other DBs
NCBI-ProteinID:
BAZ79946
LinkDB
All DBs
Position
complement(1321985..1323373)
Genome browser
AA seq
462 aa
AA seq
DB search
MVLDPNKSQKQVKTSTPIVVSPVINKLMNKHNLFIFCLLLLGLLTTSCGSLPKESAEAQS
KRTGGGERANRETSVDIAIARTQELRPPADYIGNTTPYRTVSVRSQVEGRLISLNMDVGD
TVKQGQIIGQLDDVLLITALQQAEAELATSQSEVARAMTQVSNAQTEVEKAKLELIQAQS
DSQRQQQLFKEGAISEQAAQQARTKAQTTQKALQATIERVRTEKQAVAAAQGRVFAQQAV
VKAAKERRSYSRLISPITGVVTEKVTEPGNLLQPGSEVLKIADLSRIKVVVQVSELELAK
IQVGQSVQVRLDAFPDQNIIGRVARISPSADPTARLVPIEVVIPNSGGKIGSGLLTRVNF
TTQTPQRVVVSQTAINSKDKETSAEMNNGTIFVVQETDGKTKVKEKSVTLGKKVDGNVEI
LSGLQPGESYIVRSSKPLKDGEVVKLSILSEKDLNKPQRKNL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggttttggacccaaataagtcacaaaaacaggtgaaaacatcaactcctatagttgtc
agcccagtgatcaataagctgatgaataagcataatttattcatattctgtctgctgtta
ctgggattactaacaaccagttgtggttcattaccaaaagaatcagcagaagcccaatcg
aagcggactggtggtggagaaagagcaaatagagaaacatctgtagatatagcgatcgcc
cgcacacaagaactgcgtcccccagcggactatattggtaacaccaccccatatcggaca
gtatcagtgcgatcgcaagtagaaggaagactgatatccttaaatatggatgttggcgat
acagtcaaacaagggcaaatcatcggccagttagatgatgttctattgatcacagcatta
cagcaagcagaagcagaactagcaaccagccaatcagaagtagccagggcaatgacccaa
gtaagtaacgctcaaacggaagtagaaaaagcaaagttagaactcatccaagcccaatca
gactcccaaagacagcaacaattattcaaagaaggagcaatttccgaacaagcagcccaa
caagctcgcaccaaagcccaaacaacccaaaaagccctacaagccactattgaaagagtc
cgtacagaaaaacaagccgtagcagccgcccaaggtagagtatttgcccaacaagcagta
gtcaaagccgccaaagaacgccgttcctactcccgtttaatctcccccatcaccggcgta
gttacagaaaaagtcacagaacccggtaatctcctacaaccaggaagcgaagtcttaaaa
attgctgacttgagtcgaattaaagtagtagttcaagtttctgaattagaactagcaaaa
attcaagtagggcaatctgtacaagtgcgtttagatgccttccccgatcaaaacatcatt
ggtagagtagcgcgtatttctccatctgctgatcctacagcccgtttagtacccatagaa
gtagtcattcccaacagtggcgggaaaataggtagcggactactaacaagagtgaatttt
accactcagacaccacagcgagtagtagtatcacaaacagcaattaatagcaaagacaaa
gaaacatcagcagaaatgaacaacggcacaatttttgttgttcaagaaactgacggtaaa
accaaggtaaaagaaaaatcggtaacattgggtaaaaaagttgatggtaacgtcgaaatt
ctttcagggttacaaccaggagaaagttatattgttcgcagtagtaagccattaaaagat
ggtgaagttgtcaaattatcaattttgtcagaaaaagatttaaacaaaccgcaaagaaag
aacttgtaa
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