Streptomyces koyangensis: D0C37_25835
Help
Entry
D0C37_25835 CDS
T06436
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sky
Streptomyces koyangensis
Pathway
sky00300
Lysine biosynthesis
sky00550
Peptidoglycan biosynthesis
sky01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sky00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D0C37_25835
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D0C37_25835
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sky01011
]
D0C37_25835
Enzymes [BR:
sky01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
D0C37_25835
Peptidoglycan biosynthesis and degradation proteins [BR:
sky01011
]
Precursor biosynthesis
Amino acid ligase
D0C37_25835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
T6SS_Tdi1_C
Motif
Other DBs
NCBI-ProteinID:
AXQ57678
UniProt:
A0A385DH16
LinkDB
All DBs
Position
5778123..5779967
Genome browser
AA seq
614 aa
AA seq
DB search
MDTITPEPGNHRPEGDDATGPAAPSFRDRRGAPGTLTAVPHADHSETPQAALKGAPVTYP
GPPRPLQVPATTLEELADQLGVDARGAEARVPGEEGAAVVLSGITHDSRAVRPGDVYAAL
PGARVHGADFSAQAASLGAAAILTDPAGAGPALATGLPVLVVGDPRGRMGQVAATLYGHP
GRDLLQIGITGTSGKTTTAYLIEGGLRAAQEARAKETGEEIPPTGLIGTVEMRIGDERIK
SERTTPEATDLQALFAVMRERGVRALAMEVSSHALVLGRVDACVFDIAVFNNLSPEHMEF
HSDMEDYFRAKAQLFTKARSKLGVVNYDDEYGRRLLTESEVPVISFSAEGHPDADWRAED
VIVGSLDSTFIAVGPKGERISARSPLAGPFNVANTLAAVVALAAAGVDPQTAADGIAAVP
GVPGRLERVDAGQPYLAVVDYAHKTDAVESVLRALRKVTEGRLYIVLGCGGDRDTTKRGP
MGAAAARLADLAVLTSDNPRSEDPLAILSTMLAGAAEVPIHERGDVIIDADRAGAIAEAV
VRAEAGDTVLVAGKGHEQGQDINGVVRPFDDRLVLRAAIERAEARRAAADLPGTTQQAAE
AAAGAQATPQKNAG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
gtggatacgatcacccccgaaccggggaaccaccgcccggaaggcgacgacgccaccgga
cccgccgccccctcatttcgcgaccggaggggtgcgcccggtacgctcaccgccgtgcca
cacgctgatcactccgaaacaccgcaggccgcactgaagggtgctcccgtgacctacccg
gggcctccgcgcccgctccaggttcccgccaccacgctggaggaactggccgatcagctc
ggcgtcgacgcccgaggggccgaagctcgcgtcccaggcgaagagggcgccgccgtcgtg
ctcagcggcatcacccacgactcccgcgcggtgcgccccggcgacgtctacgccgccctg
cccggcgcccgcgtccacggcgccgacttctccgcccaggccgcgagcctcggcgccgcc
gccatcctcaccgacccggccggcgcgggccccgccctcgccaccgggctgccggtgctg
gtcgtcggcgacccgcgcggccggatgggccaggtcgccgccaccctgtacgggcacccc
ggccgcgacctgctccagatcggcatcaccggcacctccggcaagaccaccaccgcctac
ctcatcgagggcggcctgcgcgccgcccaggaggcccgggcgaaggagaccggcgaggag
atcccgcccaccggactcatcggcaccgtcgagatgcgcatcggcgacgagcgcatcaag
tcggagcgcaccacccccgaggccaccgacctccaggcgctcttcgccgtcatgcgcgaa
cgcggcgtccgcgccctggccatggaggtctccagccacgccctggtcctcggccgcgtc
gacgcctgcgtcttcgacatcgccgtcttcaacaacctcagcccggaacacatggagttc
cactccgacatggaggactacttccgggccaaggcacagctgttcaccaaagcccgctcc
aaactcggcgtcgtcaactacgacgacgagtacgggcgccgcctgctcaccgagtccgag
gtgcccgtcatctccttctcggccgagggccaccccgacgccgactggcgcgccgaggac
gtgatcgtcggcagcctcgactccaccttcatcgcggtcggccccaagggcgaacggatc
agcgcccgttcgccgctggccgggcccttcaacgtcgccaacaccctggccgccgtcgtc
gccctggccgccgccggtgtcgacccgcagaccgccgccgacggcatcgccgccgtcccc
ggtgtccccggccgcctggagcgcgtcgacgccggacagccgtacctcgcggtggtcgac
tacgcccacaagaccgacgccgtcgaatcggtgctgcgcgccctgcgcaaggtcaccgag
ggacggctgtacatcgtgctgggctgcggtggcgaccgcgacaccaccaagcgcggcccg
atgggcgccgccgccgcccgcctcgccgacctcgccgtcctcacctcggacaacccgcgc
tccgaggaccccctcgcgatcctctccaccatgctcgccggtgccgccgaggtacccatc
cacgagcggggcgacgtcattatcgacgccgaccgggccggagccatcgccgaggccgtc
gtccgtgccgaggccggggacaccgtcctggtcgccggcaagggccacgaacagggccag
gacatcaacggcgtggtccgccccttcgacgaccggctggtgctgcgtgccgccatcgag
cgggccgaggcccgccgggccgccgcggacctgccgggtaccacccagcaggccgccgag
gcggccgctggcgcacaggcaacccctcagaagaacgcgggatga
DBGET
integrated database retrieval system
