Serpula lacrymans: SERLADRAFT_435668
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Entry
SERLADRAFT_435668 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
sla
Serpula lacrymans
Pathway
sla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SERLADRAFT_435668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sla03019
]
SERLADRAFT_435668
Messenger RNA biogenesis [BR:
sla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SERLADRAFT_435668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_25
AAA_29
AAA_15
RsgA_GTPase
AAA_23
MMR_HSR1
SMC_N
AAA_28
SRP54
PduV-EutP
VapE-like_dom
AAA_18
NACHT
AAA
AAA_22
Motif
Other DBs
NCBI-GeneID:
18814570
NCBI-ProteinID:
XP_007315991
JGI:
435668
UniProt:
F8NMG7
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MHTIAVSDLTYRHRSDPDAPPALSNISLHLPPGSRTILVGANGAGKSTLLQILAGKRLVN
AADIRIKGRDVFRDSPEGVTFLGTEWAMNPVVRSDIVVSYFLDSVGGYRHKERRDHLLDI
LDVDLDWHMHAISDGERRRVQLCMGLMAPWDVLLLDEVTVDLDVLVRDDLLKFLQHDSET
RGATILYATHIFDGINSFPTHVAHMRGGSFVTEATPLSSLRLNDPSNPLSLYHVALQWLT
EDREHRRALEAQGRKTRGARRNQTVPSDSETFYKKYDYNP
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccatcgcagtctctgaccttacataccgccatcgctcagacccagatgcacct
cctgccctatccaacatctctcttcatctcccccctggctcgcgcacaattctagtaggc
gcaaatggagcgggcaaatctacgctcctccagatcttggcaggcaaacgtctcgtcaat
gctgccgatatccgaatcaagggcagagatgtcttcagagattctcccgaaggcgtcacc
tttctgggcacagaatgggccatgaatcccgtagttagaagcgatatcgtagtttcttat
tttctagattccgtcgggggttatagacataaagagcgtagagaccatctccttgatatt
ctagacgtcgacttggattggcatatgcatgccatttccgacggtgaaaggcggcgagta
cagctttgcatgggtctcatggcgccctgggacgtgcttttattagacgaggtcaccgta
gatttagacgtactagtccgagatgacttattgaagttccttcaacatgacagtgagact
cgtggggcgacaatcttatatgcaactcatatctttgacggcataaactctttcccaact
cacgttgcccacatgcgaggcggttcttttgtcacagaagccactccactatcctctctc
cgactcaacgatccatccaacccgctctctctttatcatgttgcattgcaatggctcact
gaagatagagaacatcgccgtgccttggaggctcaaggtcgcaagaccagaggagcaagg
aggaaccagaccgtaccatccgattcggaaaccttctacaagaaatacgattataatcca
taa
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