Sphingorhabdus lacus: EUU25_06510
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Entry
EUU25_06510 CDS
T09898
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
slaa
Sphingorhabdus lacus
Pathway
slaa01501
beta-Lactam resistance
slaa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slaa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EUU25_06510
01503 Cationic antimicrobial peptide (CAMP) resistance
EUU25_06510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slaa03036
]
EUU25_06510
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slaa02000
]
EUU25_06510
01504 Antimicrobial resistance genes [BR:
slaa01504
]
EUU25_06510
Chromosome and associated proteins [BR:
slaa03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EUU25_06510
Transporters [BR:
slaa02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EUU25_06510
Antimicrobial resistance genes [BR:
slaa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EUU25_06510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
RND-MFP_C
Beta-barrel_RND
CzcB_C
BSH_RND
BSH_CusB
BSH_CzcB
Beta-barrel_YknX
HH_MFP_RND
PRM_STIL
Motif
Other DBs
NCBI-ProteinID:
QGY82179
UniProt:
A0A6I6L8G8
LinkDB
All DBs
Position
1384213..1385259
Genome browser
AA seq
348 aa
AA seq
DB search
MRTLPLLALLLTSCGGSEDRRDRPAPLVTTSTVSAQPFADRYIAVGNAFANEQVSVRAPV
TERITQLAFSDGSFVRSGQTLAVLAQGQETASLASAQARAREAEQQLARVAELHRRGFAT
NASLDSQTAIAAAAKAQANEAGASVGDRVVRAPFSGYASLRRISVGAVVSAGDEIATISD
IGSIKLDFTIPETMLSRVATGQTITAKAAAYPDALFSGTIKAIDPVVNAQTRTATLRATL
LNRNGMLKPGMLMSVTIESNSRTSPAVPELSLVREGSASFVYTIDSDGKAKRVPVTTGAR
QGQMVEVLSGLQAGDSIVTEGVVKLSDGVKVRLKKADGAAAQSKSGRK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
attcgcactctccccctgcttgcattgctgttgacctcttgtggtggatcggaagaccgc
cgcgatcggccagcgccgcttgtcacgacgtccacggtctctgctcagccgtttgccgat
cgctatattgcggtcggaaacgcatttgcaaatgaacaagtgtccgtgcgggcacccgtc
accgagcgaattacgcaactcgccttttccgatggctcatttgttcgaagtggtcaaact
ttggcggttctcgcccaaggacaggaaaccgcatcccttgccagtgcgcaagcccgcgca
cgggaagcagagcagcaacttgcccgggtcgcggaattgcatcgccgcggctttgccaca
aacgccagtttggacagccaaactgcaatcgctgccgccgcaaaggcgcaagccaatgag
gcgggcgcttccgtaggagaccgcgtcgtcagggcacccttttcgggctatgcatccctg
cgccgtatttcggtcggtgccgtcgtaagtgccggagatgaaatcgcgacaatcagcgat
atcggttccatcaagctggatttcacgatccccgagaccatgctctcgcgcgtggcgaca
ggtcaaaccataaccgcaaaagcggcggcttatccggatgctctgttcagtggaacgatc
aaggcgattgacccagtggtgaacgcgcaaacgaggacggcaactcttcgggccactttg
ctgaaccggaacggtatgctgaaacccggtatgttgatgagcgtcacgattgaatccaat
tcgcggacgtcccctgctgtccccgaattatccctggtgcgcgaaggcagcgcgagtttt
gtctataccatagactcggatggcaaggcgaagcgtgtccccgtgaccaccggcgcacgg
cagggccaaatggtcgaagtgctgagcggtttgcaagcgggggactcgattgtcaccgaa
ggtgtggtgaaattgtcggatggcgtgaaagtacgtttgaaaaaagcagacggtgcggcc
gctcaaagcaaatccggacgtaaataa
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