Silene latifolia (white campion): 141605753
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Entry
141605753 CDS
T11116
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00906
Carotenoid biosynthesis
slaf01100
Metabolic pathways
slaf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
141605753
Enzymes [BR:
slaf01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
141605753
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
FAD_binding_2
DAO
GIDA
HI0933_like
Thi4
FAD_oxidored
Pyr_redox_3
NAD_binding_8
Motif
Other DBs
NCBI-GeneID:
141605753
NCBI-ProteinID:
XP_074280739
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Position
10:94592248..94598723
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AA seq
536 aa
AA seq
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MECCCSLGPPKFAAMSVSPGHHYSNLKITTVSKRRKVDYYCFSSGSRNSNNIKAMNSSEG
SCVVTREDFADEEDFKKAGGSELLYVQMQKNKAMNHQSKLADKLPRISVGDGVLDLVVIG
CGPAGLALAAETAKLGLKVGLIGPDLPFTNNYGVWEDEFKALGLEGCIEQVWRDTIVYID
DDNPILIGRAYGRVSRYLLHEELVKRCFESGVSYLGVKVDKIMEGLDGHSIVASECGITI
PCRLATVASGAASGKLLEYEVGGPRVCVQTAYGLEVEVEGSPYDPNLMVFMDYRDYSKQS
FQSPEAKYPTFLYAMPMSPTRIFFEETCLASIDAMPFDLLKKKLLARLETMGVRIIKTYE
EEWSYIPVGGSLPSTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIANLVKTGHS
KTTILGQRRVENIAMQAWNTLWPQERKRQRAFFLFGLALIVQLDIEGIRSFFRTFFRVPK
WMWEGFLGSNLSSADLILFAFYMFFIAPHDLRMGLIRHLLSDATGATMIRTYMSLS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggagtgttgttgttcgcttggaccgcccaagttcgcggcaatgtcagtatctccaggc
catcattacagtaatttgaagatcacaacagtttcgaaacgacggaaagtggattattat
tgctttagtagtggcagtagaaatagtaataatattaaggccatgaatagtagtgaaggt
agttgcgtagttactagagaagacttcgcggacgaagaggattttaaaaaagcaggaggt
tcagagcttttatatgttcaaatgcagaagaataaggccatgaatcatcagtccaaactt
gctgataagctgccccggatatcggtaggagatggtgtactggatttggtggttattgga
tgcggtccagcgggtcttgcattagctgcagaaacagctaaattaggattgaaagttggc
ctcattggtcccgatcttcctttcaccaataattatggagtttgggaggatgaattcaaa
gctcttggacttgaaggctgtatcgagcaggtctggcgtgataccatcgtgtatatagat
gatgataaccctattctaattggtcgagcttatggacgagtcagccggtatttacttcat
gaggagctagtgaaaaggtgtttcgagtcaggtgtctcgtatcttggtgtgaaggtcgac
aagatcatggaaggacttgacggacatagtattgtggcttctgaatgtggtatcactatt
ccgtgcaggcttgcgactgttgcatctggtgcagcatctggaaaactcctggagtatgag
gttggtgggccaagggtttgtgtgcaaacagcttatggtctggaggtggaggttgaaggc
agtccttacgatcccaacctgatggtgttcatggattatagagattacagtaaacaaagc
ttccagtctccagaggcaaagtatccaacatttttgtacgcaatgccaatgtcccctaca
agaattttctttgaggaaacttgcttggcttcgatagatgcaatgccatttgatttgctt
aagaaaaagctcttggcacgtctagaaactatgggtgttcggatcattaaaacttatgag
gaggagtggtcttacattcctgtcggaggctctttacccagtacagagcaaaggaacctt
gcatttggcgctgctgcaagcatggtgcatccagccacagggtattcagttgtgagatca
ttatctgaggctcctaattatgcttctgcaattgcaaatttagtcaagactggtcactcc
aaaactacaattcttggacagaggcgtgtggagaatatcgctatgcaagcatggaatact
ctctggcctcaagaaaggaaacgccagcgagcatttttcctgtttgggctagcacttatt
gtgcagcttgatattgagggaatacggtcattcttccggacctttttccgggtaccaaaa
tggatgtgggagggattccttgggtctaatctgtcatctgcagatcttatattgtttgcg
ttctacatgtttttcatagcgccacatgatttgaggatggggcttataaggcatttactc
tctgatgcaaccggtgcgacaatgataagaacctatatgtcattatcttga
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