Silene latifolia (white campion): 141617180
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Entry
141617180 CDS
T11116
Name
(RefSeq) transcription factor PCL1-like
KO
K28173
GARP family transcription factor, LUX subfamily
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slaf03000
]
141617180
Transcription factors [BR:
slaf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
141617180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
InvH
DUF3952
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
141617180
NCBI-ProteinID:
XP_074290468
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Position
1:complement(198660501..198662393)
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AA seq
291 aa
AA seq
DB search
MGKHNGASFNGDQNDVVDTENERVHEWEVGLPNLDDVTPLSHGLLPSQLLSAFNIKPTPF
RTASDVAAASAVTMSSLRRSYSDSAAVLDAAGVGDIGGGVSPGDADSAAADAAEVMAAEE
EGEEDGEEKAAKRARLVWTPQLHRRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASH
LQKYRLYLKRNQVGSFDSGPSNSSAATVSVSVPRINYQQQSNQNHHHHQQQYNYYQNQQQ
QHNNMYQFSNGVMQTGNNNMYGASGVGVVYPHHHNQHLNHNYPPHVNSGDN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacataacggcgcttcttttaacggcgaccaaaacgacgtcgttgacactgaa
aacgaacgagtccacgagtgggaagtaggacttcctaaccttgacgacgtaacgccgtta
tctcacggacttcttccttcacaacttttatcggctttcaacatcaaaccgacaccgttt
cgcaccgctagcgacgtcgccgccgcttctgccgtcactatgtcctctctccgccgctct
tattccgactccgctgctgtcctcgacgctgcaggcgtcggcgacatcggcggtggagtg
tcgccgggggatgctgactcagcggcggcggacgcggcggaggtgatggcggcggaggag
gaaggggaagaggatggagaagagaaggcggcgaagcgagcgaggttagtatggacgcca
cagcttcaccggagattcgtcgatgtggtggcgcacttagggataaagaacgcggttccg
aagacgattatgcaattgatgaatgtagaaggattaactcgagaaaatgttgcaagtcat
ttacagaaatatcgactttatttgaagagaaatcaagtcggtagtttcgattccggaccg
tctaattcatcggcggcgacggtttcggtttcggttccgaggataaattatcagcagcaa
agtaatcagaatcatcatcatcatcagcagcagtataattattatcagaatcagcagcag
cagcataataatatgtatcagtttagtaatggagtgatgcagacagggaataataatatg
tatggtgcttctggtgttggtgttgtttatcctcatcatcataatcagcatcttaatcat
aattatcctcctcatgttaattctggtgataattaa
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