Silene latifolia (white campion): 141638942
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Entry
141638942 CDS
T11116
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04075
Plant hormone signal transduction
slaf04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
141638942
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
141638942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slaf03000
]
141638942
Transcription factors [BR:
slaf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
141638942
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_IRO3
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
141638942
NCBI-ProteinID:
XP_074304222
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MTNENLNSTQERATNSSDPSPRPEPDFCELVWENGQIMMQGQSSKPKKGPLTINHYQSFI
HNPQGNREVNDKKLNKFSTMDSVLSEMDLGQNVDMVPWFSYPIEEDPLHNDYTCDFLPEL
SGVTINDISADNPVAFREKRSDHNSASLKHADVSKVTSNTEHIRHEWREVTQFLQSSQHN
IPKSGVSDITSLRLQKIDAGQPCTSSSFTNFPYFSRPAIRAKANHVTVNTSKRIENEQKS
TVNCSFPTVSREDVGIHNQFVQAPVNEILGLLPRKPTEEMHLTKRTLREKDGVKDTQHNH
GFNATGNKVEAVVVASSVCSGNSVDRTSNELAYDLKRKMRESTESEGPSEEVEESVGAKN
IAHARASSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKT
LQLQVQMMSMGAGLCMQPMMLPPGMQPIHSAQMPHFSPVGLGMGMGMGFGMNPFQGPHYL
VPGAAAPFHGMQGPGLQPFAHPGHGLQMSMQQSPSHPIPDSPLKRTVGTLGTSNLVPTSA
VKDSGPQVRPTIQAATDQATKEGIQLSPSPDNRRQNVKASESLAASKTK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgaaaacctgaattcaacccaagagagggccaccaattcttctgatccttcc
cctagaccagaaccagacttttgtgagctagtttgggaaaatggtcaaatcatgatgcaa
ggtcaatcaagtaaaccaaaaaagggacctcttactataaaccattaccaatcattcatt
cataatcctcaaggtaatagggaagtcaatgataaaaaattgaacaagttcagcacaatg
gattctgtattgagtgagatggatttgggacaaaatgttgacatggtaccatggtttagt
tatcccatagaagaagatcctttacataatgattacacttgtgattttttgccagagtta
tcaggtgttaccataaatgacatctctgccgataatcctgtagcatttcgagaaaagcgg
agtgaccataattctgcaagcttgaagcacgccgatgtatctaaagtcacctcaaacact
gaacatattagacatgagtggagggaagtaactcagtttttacagtcttctcaacataat
attccaaaatcaggcgtttctgatattactagcttgagattgcagaagatagatgcaggg
cagccttgtactagctctagctttacaaactttccctatttttcacggcctgctattcgt
gccaaagctaaccatgtgactgtcaatacctcaaagagaatagagaatgaacagaaaagc
actgtaaattgtagttttcccactgtgtctcgggaggatgtagggatccacaaccagttt
gttcaagctcctgttaatgagattttagggttgttgccaaggaaacccactgaagagatg
catttgacaaaaagaactttaagggaaaaagatggtgtgaaagatactcaacacaatcac
ggatttaatgcaacgggaaacaaagtggaagcagtagttgttgcatcttctgtatgttcg
gggaatagtgtggatagaacttcaaatgagcttgcatatgatctgaaaaggaaaatgcgt
gaatctactgaatccgaaggtcctagtgaagaagtggaagagtcagtgggtgcaaagaat
attgctcatgctcgagcaagctcaaagagaagtcgagctgcagaagtgcataatttatct
gaaaggagacggagggatagaattaatgagaagatgcgtgcattgcaagagctcatacct
aactgtaataaggtggacaaggcttctatgctggatgaggcaatagagtatctgaaaacc
cttcagcttcaagtacagatgatgtctatgggtgctggtttgtgtatgcaaccaatgatg
cttccaccagggatgcaacctattcatagtgcacaaatgcctcatttttcacccgtggga
cttgggatgggcatgggaatgggctttgggatgaacccttttcaaggccctcattatcta
gttcctggtgcagcggccccgtttcatggtatgcaaggccctggtctacaaccctttgca
catccaggtcatggtttacagatgtccatgcagcaaagcccatcacatccaatccctgat
agccctctgaaaagaactgtgggaactttaggtacatcaaatttagttccgactagtgct
gtgaaggattctggccctcaagtgaggcccaccattcaggccgctactgatcaggcaacc
aaggaaggtatacagctgtctccttcacctgacaaccgaagacagaatgttaaagcctcc
gaatctcttgctgctagtaaaaccaagtaa
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