KEGG   Silene latifolia (white campion): 141639007
Entry
141639007         CDS       T11116                                 
Name
(RefSeq) transcription factor PIF1
  KO
K16189  phytochrome-interacting factor
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    141639007
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:slaf03000]
    141639007
Transcription factors [BR:slaf03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    141639007
SSDB
Motif
Pfam: HLH bHLH_SAC51 bHLH_NPAS4 bHLH_LHW
Other DBs
NCBI-GeneID: 141639007
NCBI-ProteinID: XP_074304310
LinkDB
Position
1:complement(11960640..11968635)
AA seq 647 aa
MEEDYTIPSTSTLTKSSGEDEIAELLWQNNAPVTVNLNQRLPSNFGIAPSPPPPPPLQNP
PAEAADHKLYMAEDEMASWLHYPLEDFYSELLFSNPTPSTTTSPPPTAVRPPDFPVRRSA
TGGFPQFSMMAGINPPEPVPESAIRSLSTVVGSNDTPPIMTTGDTRPGPSVSGPAVVLAN
TSSVGIISGGEGTSEGAMTVSTSSSSITTPSAATATEEADVKMTRSDIGDRKRKRIIERE
ESFVSTATTTTTPVDAQNEEVEFESSDEKKHLRGSSSTKRTRAAEVHNLSERRRRDRINA
KMKTLRDLIPRCNKSDKASMLDEAIEYLKSLKMQVQMMSMGYGMMPMMYQGMQQQYTPPM
GMGVGMGMDMGMTTRPVVPYAPAIPPATTNVMPPIAPRLPIPPYAMPSVPPPSVPTPNIL
VNQPGNLGDSSSSPYAPPGPGIPQIPNVADPFQQYLIYQQMQMQMQLQMQASQVTASPNT
KHRLLPTRFCSKRKSILVNSAQGLDMDNHSPYFPSSMKVRFLPHTGGGTSLEEVDGDDEL
KEIGYAPYEFSNEDREINIGENFDLSSLFSHTRNFLIRSNGDKVFVHNLAGKYIVIVGFY
IPMPKQSFMPHLCKDVITIYDELKSKGINDFEFVLVTHMRPEFPEFK
NT seq 1944 nt   +upstreamnt  +downstreamnt
atggaagaagactacacaattccttcaacatctactctaaccaaatcaagcggggaggat
gagatcgccgaactgttatggcaaaacaatgccccggttacagttaacctaaaccaacgt
ttaccttccaactttggaatcgcaccttcaccaccgccaccgccgccactgcagaatccg
ccagctgaggcagctgatcataagctttacatggcagaggatgagatggcgtcatggctt
cattaccctctggaagatttttacagtgaactcctgttttcgaatcctaccccttcaaca
acgacctcgccacctccaacagctgttagaccgcctgactttcctgtcaggcggtcggct
actggaggattcccgcaattttcaatgatggcgggaattaatccaccagagccagtgcca
gaaagcgcgataaggtcattgtcgaccgttgtgggttccaacgacacgccgccaatcatg
accaccggtgacacccggcctggaccgagtgtttccggtccagcagtggtgttggcgaac
acgagttccgtgggaattatttcgggtggcgaagggacttcagaaggagcaatgacagtg
tcaacatcaagcagctccatcactactccatcagcagccactgcaactgaagaagcagat
gtaaaaatgactaggagcgatattggtgaccgtaagcgaaagagaattattgaaagggag
gagtcctttgtctccaccgccaccacaaccaccaccccagttgacgctcaaaatgaggaa
gtagaatttgaatctagtgatgagaagaaacatttgcgtggatcaagctctacaaagaga
actcgagctgcagaagttcacaatctctcagaaaggagacgtcgagatcgtataaacgcg
aagatgaagacattgcgagatctcattcctcgttgtaacaaatccgataaagcttcaatg
cttgatgaggcgattgagtatttgaagtcactgaagatgcaagtacagatgatgtccatg
ggatatggaatgatgccaatgatgtaccaaggaatgcaacaacaatacacaccaccaatg
ggaatgggagtaggcatggggatggatatgggaatgacgactcgcccagtggtgccatat
gcccctgctataccacctgctacaacaaatgtcatgcctccaattgctccgagattgccc
atcccaccttacgcaatgccatccgttcctccgccttctgttcctacaccaaatattcta
gtaaaccaaccaggcaatttgggagattctagtagtagtccatatgcccctccgggccct
ggaatcccccaaatccctaacgtggccgatccatttcagcaatacctgatttaccaacaa
atgcagatgcaaatgcagctccaaatgcaggcatcacaggttacagcttcaccaaacact
aaacataggttactgccaacaagattttgtagcaagaggaaatccatacttgttaattcg
gctcaagggttagacatggacaatcattctccttatttcccgtcttctatgaaagtaagg
ttcttacctcatacgggaggtggaacttctttggaggaggtagatggtgacgatgaattg
aaagaaattggttatgccccttatgagtttagtaacgaagacagagaaataaatattggt
gaaaatttcgatttgtcttcactcttcagccatacccgaaatttcttgatccgcagtaat
ggagacaaagtatttgtgcataatctcgctggaaaatatattgttattgttgggttttat
ataccaatgcccaaacaatcttttatgcctcatttatgcaaagacgtaatcacaatctac
gatgaactcaagagtaaaggaataaatgactttgagtttgtgttggtaacgcacatgaga
cctgaatttcctgaatttaaataa

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