Silene latifolia (white campion): 141639007
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Entry
141639007 CDS
T11116
Name
(RefSeq) transcription factor PIF1
KO
K16189
phytochrome-interacting factor
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
141639007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slaf03000
]
141639007
Transcription factors [BR:
slaf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
141639007
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_NPAS4
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
141639007
NCBI-ProteinID:
XP_074304310
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Position
1:complement(11960640..11968635)
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AA seq
647 aa
AA seq
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MEEDYTIPSTSTLTKSSGEDEIAELLWQNNAPVTVNLNQRLPSNFGIAPSPPPPPPLQNP
PAEAADHKLYMAEDEMASWLHYPLEDFYSELLFSNPTPSTTTSPPPTAVRPPDFPVRRSA
TGGFPQFSMMAGINPPEPVPESAIRSLSTVVGSNDTPPIMTTGDTRPGPSVSGPAVVLAN
TSSVGIISGGEGTSEGAMTVSTSSSSITTPSAATATEEADVKMTRSDIGDRKRKRIIERE
ESFVSTATTTTTPVDAQNEEVEFESSDEKKHLRGSSSTKRTRAAEVHNLSERRRRDRINA
KMKTLRDLIPRCNKSDKASMLDEAIEYLKSLKMQVQMMSMGYGMMPMMYQGMQQQYTPPM
GMGVGMGMDMGMTTRPVVPYAPAIPPATTNVMPPIAPRLPIPPYAMPSVPPPSVPTPNIL
VNQPGNLGDSSSSPYAPPGPGIPQIPNVADPFQQYLIYQQMQMQMQLQMQASQVTASPNT
KHRLLPTRFCSKRKSILVNSAQGLDMDNHSPYFPSSMKVRFLPHTGGGTSLEEVDGDDEL
KEIGYAPYEFSNEDREINIGENFDLSSLFSHTRNFLIRSNGDKVFVHNLAGKYIVIVGFY
IPMPKQSFMPHLCKDVITIYDELKSKGINDFEFVLVTHMRPEFPEFK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagactacacaattccttcaacatctactctaaccaaatcaagcggggaggat
gagatcgccgaactgttatggcaaaacaatgccccggttacagttaacctaaaccaacgt
ttaccttccaactttggaatcgcaccttcaccaccgccaccgccgccactgcagaatccg
ccagctgaggcagctgatcataagctttacatggcagaggatgagatggcgtcatggctt
cattaccctctggaagatttttacagtgaactcctgttttcgaatcctaccccttcaaca
acgacctcgccacctccaacagctgttagaccgcctgactttcctgtcaggcggtcggct
actggaggattcccgcaattttcaatgatggcgggaattaatccaccagagccagtgcca
gaaagcgcgataaggtcattgtcgaccgttgtgggttccaacgacacgccgccaatcatg
accaccggtgacacccggcctggaccgagtgtttccggtccagcagtggtgttggcgaac
acgagttccgtgggaattatttcgggtggcgaagggacttcagaaggagcaatgacagtg
tcaacatcaagcagctccatcactactccatcagcagccactgcaactgaagaagcagat
gtaaaaatgactaggagcgatattggtgaccgtaagcgaaagagaattattgaaagggag
gagtcctttgtctccaccgccaccacaaccaccaccccagttgacgctcaaaatgaggaa
gtagaatttgaatctagtgatgagaagaaacatttgcgtggatcaagctctacaaagaga
actcgagctgcagaagttcacaatctctcagaaaggagacgtcgagatcgtataaacgcg
aagatgaagacattgcgagatctcattcctcgttgtaacaaatccgataaagcttcaatg
cttgatgaggcgattgagtatttgaagtcactgaagatgcaagtacagatgatgtccatg
ggatatggaatgatgccaatgatgtaccaaggaatgcaacaacaatacacaccaccaatg
ggaatgggagtaggcatggggatggatatgggaatgacgactcgcccagtggtgccatat
gcccctgctataccacctgctacaacaaatgtcatgcctccaattgctccgagattgccc
atcccaccttacgcaatgccatccgttcctccgccttctgttcctacaccaaatattcta
gtaaaccaaccaggcaatttgggagattctagtagtagtccatatgcccctccgggccct
ggaatcccccaaatccctaacgtggccgatccatttcagcaatacctgatttaccaacaa
atgcagatgcaaatgcagctccaaatgcaggcatcacaggttacagcttcaccaaacact
aaacataggttactgccaacaagattttgtagcaagaggaaatccatacttgttaattcg
gctcaagggttagacatggacaatcattctccttatttcccgtcttctatgaaagtaagg
ttcttacctcatacgggaggtggaacttctttggaggaggtagatggtgacgatgaattg
aaagaaattggttatgccccttatgagtttagtaacgaagacagagaaataaatattggt
gaaaatttcgatttgtcttcactcttcagccatacccgaaatttcttgatccgcagtaat
ggagacaaagtatttgtgcataatctcgctggaaaatatattgttattgttgggttttat
ataccaatgcccaaacaatcttttatgcctcatttatgcaaagacgtaatcacaatctac
gatgaactcaagagtaaaggaataaatgactttgagtttgtgttggtaacgcacatgaga
cctgaatttcctgaatttaaataa
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