Silene latifolia (white campion): 141656830
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Entry
141656830 CDS
T11116
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
141656830
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slaf01007
]
141656830
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaf03016
]
141656830
Enzymes [BR:
slaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
141656830
Amino acid related enzymes [BR:
slaf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
141656830
Transfer RNA biogenesis [BR:
slaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
141656830
Prokaryotic type
Other AARSs
141656830
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
DNApol3-delta_C
Motif
Other DBs
NCBI-GeneID:
141656830
NCBI-ProteinID:
XP_074319989
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All DBs
Position
5:15427346..15446730
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AA seq
1180 aa
AA seq
DB search
MEDVCEGKDFSFPLEEEKILEFWDKIQAFETQLSKTSQNPEYIFYDGPPFATGLPHYGHI
LAGTIKDVVTRYQSSNGRHVTRRFGWDCHGVPVEHEIDTKLGIKSRADVIEMGIGKYNEE
CRSIVTRYVKEWEMVVKRTGRWIDFQNGYKTMDLGFMESVWWVFSMLHQKGLVYRGFKVM
PYSTGLKTPLSNFESNLNYKEVPDPEIMVTFPIVGDQHNASFVAWTTTPWTLPSNLALCV
NANFVYVKVRSKASGSTYVVAESRLSQLPKEKPKTESKPKEPVKDSKNKTKGSAADKNST
DDNSYELLEKLPGSSLVGLKYVPLFDYFQEFSDVAFKVVADNYVTDDSGTGIVHCAPAFG
EDDYRVCLENQIIEKGPDLIVAVDDDGCFIERVYDFKGRYVKEADKDIINAVKQKGRLLK
QGNFTHSYPFCWRSETPLIYRAVPSWFVRVEKIKDQLLENNKQTYWVPDFVKEKRFHNWL
ENARDWAVSRSRFWGTPLPVWMSDDGKEIRVISSIEELEKESGEKVTDLHRHFIDHLTIP
SKHGNGVLRRVDDVFDCWFESGAMPYAYIHYPFENKELFESNFPGDFVAEGLDQTRGWFY
TLMVLSTALFSKPAFKNLICNGLVLAEDGKKMSKRLKNYPAPSEILNEYGADALRLYIVN
SPVVRAEPLRFKKDGVYGMIRDVFLPWYNAYRFLVQNAKRLEIEGFGTFIPMDQSALKSS
SNVLDQWINSATQHLVHFVRQEMDAYRLYTVVPQLLKFLDDLTNIYVRFNRKRLKGRTGE
EDCKIALSTLYHVLLTSCKAMAPLTPFFTEVLYQNLRRVCEGAEESIHYCSFPQAEGKGD
ERIVQSVSRMTKIIDLARNIRERHNKPLKTPLREMVVVHPDNDFLDDIAGKLREYVLEEL
NIVSLVPCNNPLKYASLRAEPDFSVLGKRLGKSMGVVAKEVKALTQDDVLAFEKAGEVTI
AGHCLKLTDIKVLRDFKRPDDTTEEDIDAAGDGDVLVILDLRPDDSLFEAGVAREVVNRI
QKLRKKASLEPTDVVEVYISPSEKDVSTLKQVLNSQERYVRDAIGSPLLLPEVMPSHAVV
FCEESFHGVYNMSFTISLSRPTLVFIDEALLSLYEGNSTFARGLQVYLKSRDSNNLKSEF
QAGNGKIRVDCIKDQPPVDVLLGQHLFLSAGEYYLSTKSG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgtttgcgaaggtaaagacttctccttcccattagaagaagagaaaatcctc
gaattctgggataaaatccaagcattcgaaacccaactctcaaaaacctctcaaaaccca
gaatacatcttctacgacggaccgcctttcgctactggtctcccgcattacggccacatt
ttggcgggaacaatcaaagatgtcgttacaagataccaatcgtcaaacgggcgccatgta
acccgccggttcgggtgggattgccatggggttccggttgagcatgaaatcgatacgaag
ctcgggattaaatcgcgggccgatgttattgaaatggggattggaaagtataatgaggag
tgtaggagtattgttactaggtatgttaaggaatgggagatggttgttaagagaactggg
agatggattgattttcaaaatgggtataagactatggatttagggtttatggaatctgtt
tggtgggtttttagtatgttgcatcagaaggggcttgtttatcgcggctttaaggtcatg
ccatacagtactggtttgaagacccctctttcaaacttcgagtccaatttgaactataag
gaagtacctgaccctgaaattatggtaacttttcctattgttggtgaccaacataatgcg
tcgtttgttgcatggactacaaccccatggacccttcccagtaacttagcattgtgcgtc
aatgccaactttgtgtatgtaaaggtgagaagcaaagcttcgggctcaacttatgtggtt
gcagagtcccgtttgtcacagcttcctaaggagaaaccgaaaactgagagtaaaccaaaa
gaacctgtaaaagattcaaagaataaaacaaagggatctgcagctgataaaaactccacc
gacgataactcatatgagctgctagaaaagctaccaggttcatcattggttggactgaaa
tatgtacccttattcgactacttccaggagttttcagatgtggcttttaaagttgttgcg
gacaactatgtgactgatgatagtggaactggaatagttcactgtgctcctgcttttgga
gaagatgactaccgtgtttgcctggaaaatcaaattattgagaagggaccagacttgatt
gtagctgttgatgatgatggttgcttcattgaaagagtgtatgactttaaaggacgttat
gttaaggaagctgataaagatatcataaatgcagtgaagcaaaaaggcaggctcctcaag
cagggaaattttacccattcttaccctttctgttggagatctgaaacccctctcatttac
agggctgttccaagttggtttgttagagtggaaaagataaaagatcagttgctggagaac
aataagcagacttattgggttcctgattttgtcaaggagaaacgcttccacaattggctg
gaaaatgctagggattgggctgtcagtcgaagtagattttggggtacccctcttccagta
tggatgagtgatgatggaaaggaaattagagttatttcttctatcgaggaactagagaag
gaatcgggagaaaaggtcactgatctgcaccgtcactttatcgatcatctaactattcca
tctaagcatgggaatggtgttcttagacgtgtggatgatgtgtttgattgctggtttgag
agtggtgcaatgccttatgcatacatccattatcctttcgaaaacaaagagctttttgaa
agcaactttccaggggattttgtggcagaagggctggatcagactcgtggatggttttac
accttaatggtgctctctacggcattattcagtaagcctgcttttaaaaatctcatctgc
aatggtcttgtccttgctgaagatggtaaaaagatgagtaagcggctaaagaattatcct
gcgccctctgaaattctgaatgagtatggagcagatgccttgcgtttgtacattgtaaat
tcgccggttgttcgtgcagagcctttacgttttaagaaagatggagtttatggcatgatc
agagacgtgttcctcccatggtacaatgcatacagatttcttgttcagaatgccaagaga
ctagaaattgaaggctttggaacgttcattcctatggatcaaagtgctttaaaaagctct
tctaatgtccttgaccaatggatcaactcagctacccaacacctggttcattttgtgcga
caagaaatggatgcgtatagactgtacacggttgttcctcaacttctgaagtttcttgac
gatctgacaaatatctacgtaagattcaaccgcaaacgattgaaaggccgtacaggagag
gaagattgcaagattgcactttctactctttatcatgtactgctaacatcatgtaaggca
atggctcccttgactcctttcttcacagaagttctttaccaaaatttaagaagagtttgc
gagggagcagaagaaagcattcactattgcagttttcctcaagcagaaggaaagggagac
gaacgcattgtgcaaagtgtatcaaggatgactaaaattattgaccttgctcgaaatatc
cgagagcgccacaacaagcccctgaagactccccttagggagatggtggtcgtacacccg
gacaacgattttcttgatgatatagctggtaaactgagagagtatgtgcttgaagagctg
aatatagtgtcacttgtcccctgcaacaatcctctgaaatatgcttcacttcgtgccgag
cccgatttcagtgtgctgggcaaaaggcttggaaaatctatgggagtggttgcaaaggaa
gtcaaggcattgactcaggatgatgtattagcatttgagaaagctggagaagtcaccatt
gctggccattgtttgaagctgactgatattaaggttttgagggatttcaagcgtcctgat
gatacaacagaagaggacattgatgctgcaggagatggcgacgtcttggttattcttgat
ttacgtcctgatgattcattatttgaagctggtgttgctcgtgaggttgtcaaccgcatc
caaaagttgcggaagaaagccagtcttgaaccaactgatgtagtggaggtgtacatcagt
ccatctgagaaagatgtatcgaccttgaagcaagttctaaattcacaggaacgatatgtg
agggatgctattggctcacccttgcttctcccggaagttatgccgtctcatgcagttgtt
ttttgtgaagaaagctttcatggtgtatacaatatgtcattcactataagtctatcacgg
ccgacactggtgttcatagatgaagcattactcagtttatacgaaggaaactccaccttt
gcccgaggtttgcaagtttaccttaaatcaagagattccaataacctgaagtcagaattt
caagcaggaaatggcaagattagggttgactgtatcaaagatcagccgccggtggatgta
ctattgggtcaacatttgttcttgagcgccggagaatattacttgagcaccaaatctggg
tga
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