Streptomyces laculatispora: P8A22_11130
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Entry
P8A22_11130 CDS
T09657
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
slai
Streptomyces laculatispora
Pathway
slai03030
DNA replication
slai03410
Base excision repair
slai03420
Nucleotide excision repair
slai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P8A22_11130 (ligA)
03410 Base excision repair
P8A22_11130 (ligA)
03420 Nucleotide excision repair
P8A22_11130 (ligA)
03430 Mismatch repair
P8A22_11130 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slai03032
]
P8A22_11130 (ligA)
03400 DNA repair and recombination proteins [BR:
slai03400
]
P8A22_11130 (ligA)
Enzymes [BR:
slai01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
P8A22_11130 (ligA)
DNA replication proteins [BR:
slai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
P8A22_11130 (ligA)
DNA repair and recombination proteins [BR:
slai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
P8A22_11130 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P8A22_11130 (ligA)
MMR (mismatch excision repair)
DNA ligase
P8A22_11130 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P8A22_11130 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH_5
HHH
Zn_ribbon_TFIIB
zf-IS66
Motif
Other DBs
NCBI-ProteinID:
WLQ40490
UniProt:
A0ABY9I0V9
LinkDB
All DBs
Position
complement(2626025..2628232)
Genome browser
AA seq
735 aa
AA seq
DB search
MAGEEQTAVPAEARTAVPAEARERHALLAEQIEEHRFRYYVNDQPVVSDTEFDRLMRELE
ALEDTYPQLRTPDSPSQKVAGPYRTEFTSVEHRERMLSLDNAFDDDELATWGERVARDVG
ATGYHFLCELKIDGLAVNLTYEHGLLTRAATRGDGRTGEDITPNVRTIAEIPHRLKGDRI
PALVEIRGEVFFPMEGFEALNARLVEADDKPFANPRNAAAGSLRQKDPKVTAGRPLHMVV
HGIGAREGFDIDCLSHAYELLHAWGLPTAKHNKVVDSLDGVREFIAYFGENRHSVEHEID
GVVVKLDEIPLQGRLGSTSRAPRWAIAWKYAPEEVNTKLVNIRVGVGRTGRVTPYAQVEP
VEVAGSEVEFATLHNQNVVRAKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGTERAFVMP
TECPECGTELRPMKEADIDVRCPNARSCPAQLRERVAYLAGRKCLDIDHFGYVAAAALTR
PLEPADPPLRDEGDLFGLTVDQLLPIRAYVRDMDSGLPKRDPKTGEEKTAMVFANQQGEP
KKNAVAMLEAIAEAKEAPLARILTGLSIRHVGPVAAQELARQFRSIERIDEATEKELSDA
DGVGPIIAASVKAWFAEEWHREILRKWREAGVRMEDEGAGEEEGPRPLEGLTVVVTGTLA
SHTRDGAKEALQSRGAKVTGSVSKKTSFVVVGDNPGSKYDKAMQLKVPVLNEDGFAVLLA
DGPEAAREAAVPAEE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgaagagcagacggcagtgccagcggaggcacggaccgcggtgccagcggag
gcacgggagcggcacgcgctcctcgccgagcagatcgaggagcaccgcttccgctattac
gtgaacgaccagccggtcgtcagcgacaccgagttcgaccggctgatgcgtgagctggag
gctctggaggacacgtatccgcagctgcgcacgcccgactcgccgtcccagaaggtcgcg
ggcccctaccggacggaattcacctccgtcgagcaccgcgagcggatgctgtccctggac
aacgccttcgacgacgacgagctggccacctggggcgagcgggtcgcccgggacgtcggc
gccaccggctaccacttcctgtgcgagctcaagatcgacggcctcgcggtcaacctcacc
tacgagcacggcctgctgacccgggccgcgacccgcggcgacggccgcaccggcgaggac
atcacgcccaacgtccggacgatcgcggagatcccgcaccggctgaagggcgaccgcatt
ccggcgctcgtcgagatccgcggcgaggtcttcttccccatggaggggttcgaggcgctc
aacgcccggctggtggaggcggacgacaagccgttcgccaacccgcgcaacgcggcggcc
ggttcactgcgccagaaggaccccaaggtcaccgccggccggccgctgcacatggtggtg
cacggcatcggggcccgtgagggcttcgacatcgactgcctctcgcacgcctacgagctg
ctgcacgcctggggactgcccaccgccaagcacaacaaggtggtggactccctggacggg
gtcagggagttcatcgcctacttcggcgagaaccggcactcggtggaacacgagatcgac
ggtgtcgtcgtcaagctcgacgagatcccgctccagggccggctcggctccacctcacgc
gcaccgcgctgggcgatcgcctggaagtacgcgccggaggaggtcaacaccaagctggtc
aacatccgggtcggcgtcggccgcaccggccgcgtcaccccgtacgcccaggtggaaccg
gtcgaagtggccggttccgaggtcgagttcgccaccctgcacaaccagaacgtggtccgg
gcgaagggcgtcctgatcggcgacacggtggtgctccgcaaggccggcgacgtgattccg
gagatcctcggcccggtcgtcgacctcagggacggcaccgagcgggcgttcgtcatgccc
accgagtgccccgagtgcgggacggagctgcggcccatgaaggaggccgacatcgacgtc
cgctgccccaacgcccgctcctgcccggcccagctgcgcgagcgcgtcgcctatctggcc
ggtcgcaagtgcctggacatcgaccacttcggctatgtggcggccgccgccctgacccgt
ccgctggagccggccgatccgccgctgcgcgacgagggcgatctgttcgggctgaccgtc
gaccagctgctgcccatccgggcctatgtccgcgacatggacagcggactgcccaagcgc
gacccgaagaccggggaggagaagaccgccatggtcttcgccaaccagcagggcgagccg
aagaagaacgccgtcgccatgctggaggccatcgccgaggcgaaggaagcgccgctggcc
cggatcctcaccgggctctcgatccgccacgtcgggcccgtcgccgcgcaggaactggcc
cgtcagttccgctccatcgagcggatcgacgaggccaccgagaaggagttgtccgacgcc
gacggggtcggaccgatcatcgcggcctcggtcaaggcctggttcgccgaggagtggcac
cgggagatcctgcgcaagtggcgggaggccggggtccggatggaggacgagggggccggc
gaggaagaggggccgaggccgctcgaagggctcaccgtcgtcgtcaccggcacgctggcc
tcgcacaccagggatggcgcgaaagaagccctgcagagccgcggagcgaaggtgacgggc
tccgtttcgaagaagacctccttcgtggtggtcggcgacaaccccgggtcgaagtacgac
aaggccatgcagctgaaggtgcccgtgctgaacgaggacggcttcgccgtgctgctcgcg
gacgggcctgaagcggcgcgcgaggcggcggtgccggccgaggagtag
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integrated database retrieval system
