Seriola lalandi dorsalis (Yellowtail amberjack): 111647046
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Entry
111647046 CDS
T06058
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111647046 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
slal04990
]
111647046 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
slal04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
111647046 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
111647046
NCBI-ProteinID:
XP_023252418
LinkDB
All DBs
Position
Unknown
AA seq
1552 aa
AA seq
DB search
MAWIKLGLLFSFGVFLSPVCVSAEQQQGHGGFRRLYVLQPGPSSGSAGADGGVRVSSIST
RRGAVGQPHTYNVELTANFGGQVRTRRMGNQAASVPVFSQQQQQQQVVRQSGAEQSQQKQ
LLKLSGVNVCGGQCCHGWSKAQGSQRCTKPNCVPQCQNGGMCLRPQLCVCKPGSKGKACE
QKTVSTHPFPAAPGNEPTNGHNTGHTNGHNGVPQRPIPQQVSPHGYASAPPPATNMAQMK
LTVKPAPQLVRPHYIQQHIQQQIRPIPMHPVQNHQYIIKPKYYHTHTTQTHVQSQPERPI
PLRVGHNPFHAVGNHTGRIKVVFTPTICKLTCTGGKCHNNCEQGNTTTIISENGHATDTL
TAPNFRVVVCHLPCMNGGKCSARDKCQCPPNFTGKFCQIPVHNGHQQHQQTVGSYSQTQV
HSTHTLPLTYSNGQGTVFSPSIVNIHIKHPPEASVQVHQVSQLDNYHNNGHQLKGPQSGS
SSSTSYTYHHTESSQKIQHHGYNIVYPGQHGYQVPQYQPVTSKNTLGRCFQETTGSQCGK
ALPGLTKQEQCCGTIGTSWGFHKCQKCPKKPSIPLIDCPQGYRRVNSSHCQDLDECQLQG
VCPNGNCLNTVGSYRCMCKPGYVPDPTLTTCISNTPAIQEEKGACFRLVSSGRQCLHPVS
AHLSKQLCCCSVGKAWGPRCDKCPSPGTAKFKEICPGGMGYTVLPNPPVNKPVTVYQEPS
HLPPPQPLPTPERPVEAFGKPEEIIPVATAAPDQELLVPVFNNRPVVEPILPQLSPGVST
VKMEAAYPEVVERSSPPAPVEILPSNAGQDIAPTQATDIDECQIIPYICGQQGICYNTAY
SFICQCQKGYSMSDDHGTCVDVDECVKTPSLCSGGECQNTEGSFLCVCPRGFLVDEEGTS
CVDIDECVNSTVCPSGICFNVPGSYDCGSCPDGFMAQGGQCVDVDECQDQRVCTRGHCLN
TEGSFICECGPGFRVSAAGDQCNDVNECVEEAQPCEDIGECVNSLGSYTCTCPQGYQQIN
GTSCIDVDECVDEPELCSPHGECLNTQGSYLCVCESGFTANLDTPSCDDIDECGLNETLC
GPHGFCENRLGSFRCLCDQGYQESQDGYGCVDVNECEMLGSVCGEAQCVNTDGSFLCECP
SGQDYKLNVAKCEPVPTVSVSSVERKECYFHLNDENLCESVLTSHVTLQECCCTLGAGWG
DNCEVHPCPVNGTDQFNLMCPSGRGFIPGADPLYGASPADGYRDADECSLFGEEVCKGGF
CLDTVGSYECYCKTGQDYDPARLECRDINECVDESVCVGGQCLNTDGSYMCFCTHPMVLD
PSSNSCVLMPEGVESHEAEQVDYQGICWQKVTDTSTCTDPLGLNRKTTYTECCCLYGEAW
GMECALCPPRHTEDYAAMCNLPLGGGWRPYGHDALSAGPVHEYEVSPDYSPSPEQQAVLP
FYNEEPPFKAFEGLRAEECGILNGCENGRCVRVQEGYTCDCFDGYTFDVSRMACIDVNEC
SELNSRMSLCKNAKCINTVGSYQCVCLPGFTASDKPNYCVEATTHQTSTHTQ
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggcttggattaaattgggccttttattttcgttcggtgtgtttctctccccggtgtgt
gtgtcagcggagcagcagcagggccacggcggcttcaggaggctgtacgtgctccagccg
gggccgtcgtcgggttcggccggtgcggacggcggggtgcgggtcagctccatctcgacg
cgccgcggcgcggtcgggcagccgcacacgtacaacgtggagctcaccgccaacttcggc
ggccaggtccggacccgcaggatggggaaccaagcggcttcggtgccagtgttcagtcag
cagcagcagcagcagcaggtcgtccggcagagcggagcggagcagagccagcagaagcag
ctcctgaagctgtccggggtgaacgtctgtggagggcagtgctgccatggatggagtaaa
gctcaggggtcgcagcgctgcactaaacccaactgcgtccctcagtgccagaacggagga
atgtgcctgaggcctcagctctgtgtctgcaagcctggctcaaaggggaaggcatgcgag
cagaagactgtgtccacacaccccttcccagcagcacctgggaacgaacccaccaacggg
cacaacactggtcacactaatggacacaatggagtaccacagcggcccatacctcagcaa
gtgtctccccatggctacgcctctgcccccccaccggcgaccaatatggctcagatgaaa
ctcactgtcaagccagccccacagctcgttcgaccacattacatccagcaacacatccag
cagcagatccggcccattcccatgcacccagtacagaaccatcagtacattataaagccc
aaatactaccacacacacaccacacagacccacgtccagtcccaaccagagagaccgatc
cccctgagagtgggacacaaccccttccatgcagtgggcaaccacactgggaggatcaag
gtggtcttcacacccaccatctgcaagctgacctgcactggaggcaagtgtcacaacaac
tgtgagcagggaaacaccaccaccatcatcagtgagaacggccacgctacagacacactg
actgcacccaacttcagagtagtggtgtgtcacctcccatgtatgaatggaggcaagtgc
agcgccagggacaagtgtcagtgtcctcccaacttcaccgggaagttctgccagataccg
gttcacaacggacaccagcagcaccagcagacggtgggcagctacagccagacccaggtc
cactccacacacacactgccactgacctacagcaatggccagggaactgtgttcagcccc
agcatcgtcaacatccacatcaaacatcctccagaggcctcggtccaggtccaccaggtg
tctcagctggacaactaccacaacaacggtcaccagctgaaaggtccccagtctggctct
tcctcgtccaccagctacacctaccaccacaccgagagcagccagaagatccagcaccac
ggctacaacatagtctaccccggtcagcacggctaccaggttcctcagtaccagcccgtc
acctccaagaacacgctgggccgctgcttccaggagaccacaggcagtcagtgtgggaag
gctctgccaggtctcaccaagcaggagcagtgctgtgggaccatcgggacgtcctggggt
ttccacaagtgccagaagtgtccaaagaaaccatccatcccactgatagactgtcctcag
ggctacaggagagtcaacagctctcactgccaagatctggacgagtgccagctgcaggga
gtttgtcccaatggaaactgtctgaacaccgtgggcagctacaggtgcatgtgtaaacct
ggctatgtccccgaccccacactcaccacgtgcatatccaacacgcccgccatccaagaa
gagaagggcgcttgcttccgtttggtcagctcagggaggcagtgtttgcacccggtttct
gcccacctgagcaaacagctctgctgctgcagtgtgggcaaagcctggggccctcgctgt
gacaaatgcccctctccaggaacagctaagttcaaagagatctgtcctggtggaatgggc
tacactgttctaccaaatccacctgtcaataagccagtcaccgtttatcaggagccctcc
catctgccccccccccagcccctgccgacacctgagcgaccagtggaggcctttgggaaa
ccagaggagatcataccagtagcaacagctgcaccagatcaggagctgctagttcctgtg
tttaataataggccagtagttgaacctatcctgccccagctgtctccgggggtgtccact
gtcaagatggaggcagcctacccagaggttgttgagaggagctctccacctgcaccagtg
gagatcctcccatccaacgctggccaggacatcgcccccacccaggcaaccgatattgat
gagtgtcagatcatcccttatatctgtggccagcagggcatctgctacaacacagcttac
agcttcatctgccaatgtcaaaagggatactccatgtctgatgaccatggcacctgtgta
gatgtagatgagtgtgtgaagactccatctttgtgctctggtggtgagtgccagaacaca
gagggcagcttcctgtgtgtgtgtcccaggggattcctggtcgatgaggaggggaccagc
tgtgttgatattgatgaatgtgtgaacagcactgtgtgtccttctggcatctgcttcaac
gtgccggggagttacgactgtggctcctgtcctgatggcttcatggcacagggaggccag
tgtgtagatgtggatgagtgtcaggaccagcgggtctgtaccaggggccactgtctgaac
accgagggctccttcatctgtgagtgtgggccgggcttcagagtgtcagcagctggagac
cagtgtaacgatgtgaacgagtgtgtggaggaggctcagccctgtgaggatataggggag
tgtgtcaacagtctgggctcctacacctgtacctgtccacagggataccaacagatcaac
ggcaccagctgtatagatgtcgacgagtgtgtggacgagccagagctttgctccccccac
ggagagtgtctaaacacacaggggtcctacctgtgtgtgtgtgagagtggattcaccgcc
aacctcgacacaccctcctgtgacgacattgatgagtgtggcctcaacgagacgctgtgt
ggcccccacggcttctgtgagaacagactgggctcttttagatgcctctgcgaccagggc
taccaggagtcccaggacggctacggctgtgtggatgtgaatgagtgtgagatgctgggc
agtgtttgtggagaagctcagtgtgtcaacacagacggctccttcctctgtgagtgtccc
agcggccaggactacaagctcaacgtcgccaagtgtgaacctgttcccacagtgtcagtg
tcgtcagtggagcgtaaggagtgctacttccacctcaatgacgagaatctgtgtgagagc
gtgctaaccagccacgtcaccctgcaggagtgctgctgcacgctgggagccggctggggt
gacaactgcgaggtgcacccatgtcctgtcaatggcacggaccagtttaacctgatgtgt
ccgtctggtagaggcttcatccccggtgcggaccctctgtacggagcctcccccgctgac
ggctacagagatgcagatgagtgttcactgttcggtgaagaggtgtgtaaaggaggcttc
tgcctggacactgtgggcagctacgagtgttactgcaagaccggacaggactacgaccct
gcgaggctggaatgcagagacatcaacgagtgtgtggatgagtcggtgtgtgttggggga
cagtgtctgaacacagatggctcatacatgtgtttctgcacacaccccatggtgctggac
cccagcagtaacagctgtgtgctcatgcctgagggagtcgagtctcatgaggcagagcag
gtggactaccaggggatctgctggcagaaagtcacagacacctcgacatgcaccgatccg
ctgggtctcaacaggaagaccacgtacacagagtgctgctgcctgtacggagaggcctgg
ggcatggaatgtgctctgtgtccccccagacacacagaggactatgctgccatgtgtaac
cttcctctggggggtgggtggcggccgtacggtcatgacgccctttctgccggtccggtc
catgaatatgaagtgagcccggactattctccgtcacctgagcagcaggccgtcctgcct
ttctacaacgaggagcctccattcaaggcgttcgagggtctgcgagcagaggagtgtggg
atactgaacggctgtgagaatggccgctgtgtccgggttcaggagggctacacctgcgac
tgctttgatggatacaccttcgacgtgtcccgcatggcctgcattgatgtgaacgagtgc
tcagaactcaacagtcggatgtcactgtgtaaaaacgccaagtgcatcaacacagtgggc
tcctaccagtgtgtgtgtctgccggggttcacggcctccgacaaacccaattactgcgtg
gaggccacaacacaccaaacatcaacacacacacagtga
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integrated database retrieval system
