KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111647571
Entry
111647571         CDS       T06058                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03420  Nucleotide excision repair
slal04110  Cell cycle
slal04114  Oocyte meiosis
slal04120  Ubiquitin mediated proteolysis
slal04141  Protein processing in endoplasmic reticulum
slal04310  Wnt signaling pathway
slal04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111647571 (rbx1)
   04120 Ubiquitin mediated proteolysis
    111647571 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    111647571 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    111647571 (rbx1)
   04350 TGF-beta signaling pathway
    111647571 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    111647571 (rbx1)
   04114 Oocyte meiosis
    111647571 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:slal04121]
    111647571 (rbx1)
   03400 DNA repair and recombination proteins [BR:slal03400]
    111647571 (rbx1)
Enzymes [BR:slal01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     111647571 (rbx1)
Ubiquitin system [BR:slal04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   111647571 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     111647571 (rbx1)
   Cul2 complex
     111647571 (rbx1)
   Cul3 complex
     111647571 (rbx1)
   Cul4 complex
     111647571 (rbx1)
   Cul7 complex
     111647571 (rbx1)
   Cul8 complex
     111647571 (rbx1)
   Cul9 complex
     111647571 (rbx1)
DNA repair and recombination proteins [BR:slal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      111647571 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      111647571 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 111647571
NCBI-ProteinID: XP_023252959
Ensembl: ENSSLDG00000018791
UniProt: A0A3B4Y7V1
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggatgtagatacaccgagcggcacaaacagcggagcaagcaaaaag
cgatttgaagtaaagaagtggaatgctgtggcgctgtgggcctgggacattgtggtggat
aactgtgctatctgtcgaaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttctgcaacttctgaggagtgcactgtagcctggggtgtctgcaatcatgccttccat
ttccactgtatttctcgttggctgaaaaccagacaggtgtgtcctctggacaacagggag
tgggagtttcagaaatatggacactag

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