Seriola lalandi dorsalis (Yellowtail amberjack): 111647577
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Entry
111647577 CDS
T06058
Symbol
smcr8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111647577 (smcr8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111647577 (smcr8)
Membrane trafficking [BR:
slal04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
111647577 (smcr8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
111647577
NCBI-ProteinID:
XP_023252966
Ensembl:
ENSSLDG00000019009
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MIGSPDVVAFTKEDEYGQTSPDPWALPEEFSIPLHPLADSNPWAKTSYAKFTKDFILISE
FSEQVGPQPLLTIPDDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSQASEC
LKAGNRRAFAKELQRKLRDLEYTHSVLQREEGLQREAGPQCMYSAHAVEKANELANVEKS
IYEHRDLLRQISSYHCRPRRDPHAVTCQKCMTECLRECEALLDKYAKLANPFSYTDKGGK
GEEGQVEGGEKEVEEDVKRRPSYTPQLIKAKSAKCFDKRLKTLQELCDQTFYGATVELLK
ETERSFRGDLCYLHTRRLDKTLRRRQRVTNFLFEEDLGDDDEDEGGTLRPFCAVNHAVDN
YTLLSPPPIVLGPEPLKLDSLEPPDPLDPASETSHTQESELGLGESHLESSPSDQTLETQ
ESSEETKGSFSSDKSGMGPAQKHESLASVRSEPPDPDSDLTLDPDHNADLERESSSEETT
AGEDEGDQTPVSLLEVVSELEASREDDCERGSDGACEMESDLLVPMDTACCMAQEGFLYE
ASPPEADLHLGQSSHHQPSHTLVVNQEPQALLPLQDDYTVGSPCSESPAAGLELPVGLLG
DAVSRTSVEDGSDCTMSASTGSDRAASPLGYGGVVTLRQRKKAGQGALRFVRQYPFAIQA
LWCLLSGRTLVVLGADEGRVRRLVAALALFVPGPGKCGERVQAWLSCPFTLTDLQRWKLV
GLQRVASPVGSSMLYSLSRYSRYISILDADQKTLRCPPYRGQLLANVADHRTYIRRGSTY
FLQVQSTLCRMAAKAFLFTFTHHLHLPVSSAEGPEVVEGRRRCFLQEQLGLGEEDSQILL
YLSQLVTQQYLQPATGGSAAAAPCFSFNYTTSVLYKI
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgataggctcacctgacgtggtggctttcactaaagaggatgagtacggccagacaagt
ccggacccctgggctctccccgaggagttctccatccctctccatcctctggccgactcc
aacccctgggccaaaacctcctacgccaagttcaccaaagacttcatcctcatctccgag
ttctccgagcaggtgggccctcagccgctcctcaccatcccagatgaccccaaagtctgt
ggcaccttcgatctcaactacttctccctgcgcatcatgtcggtggactaccaggcctcc
ttcgttgggcacccgcctggcagcggctacccgagactcagctttgtggaggactcgagg
gtggtgctgggcgactcgaaggagggggcgttcgcctacgtccatcaccttactctgtat
gacctggaggcgaggggctttgtgcgaccgttctgcatggcgtacgtttcagcagatgag
aggaaaatcatgctgcagtttcaggagctgtccctccgcttctctcaggcctctgagtgt
ctgaaggccgggaacaggagagccttcgccaaggaactccagaggaagctgcgggacctt
gagtacactcactccgtgctgcagagggaggagggcctgcagagagaggcggggcctcag
tgcatgtactccgctcacgctgtggagaaagccaatgagcttgctaacgtggaaaagagc
atctacgaacacagagacctgctgaggcagatcagctcctaccattgccgcccgcgccgg
gatcctcacgctgtcacctgccagaagtgcatgaccgagtgcttgagggagtgtgaggcg
ctgttagacaaatacgccaagctcgccaatcccttcagttacaccgacaaaggggggaaa
ggggaggaaggtcaggtggaaggaggtgaaaaggaagtggaggaggacgtcaaacgcagg
ccgtcctacacaccacagctgatcaaagccaagtctgccaagtgtttcgacaagcgcctg
aagaccctccaggagctgtgtgaccagactttctacggggccaccgtggagctcctgaag
gagacggagaggagtttccggggcgacctgtgttaccttcacacacgccgccttgacaag
actctgcgcaggagacagagagttaccaacttcctgtttgaggaggatctcggtgatgat
gatgaggatgaaggaggaacactaagaccgttttgtgctgtgaaccacgctgtagacaac
tatacactcttaagtccacctccgattgtgctgggaccagaacctctaaagctggactca
ctggagcctccagatcctttagacccggcctctgagaccagccatactcaggagagtgag
cttgggctcggggagagccacctggagtcctccccctcagaccagactctggagacccag
gagagctcagaggagaccaaaggaagctttagcagcgataagagcgggatgggtccagca
cagaagcacgaaagtcttgctagtgtgaggtcagaacctcccgatcctgattccgacttg
acccttgaccccgaccacaacgctgacctggagagggagagcagcagtgaagagaccact
gcaggggaggatgagggagaccagacgccggtgtctctgctggaagtggtgtctgagctg
gaggccagcagagaggacgactgtgagagaggaagtgatggggcttgtgagatggagtcc
gacttgttggttccgatggacactgcgtgctgtatggctcaagagggtttcctgtatgag
gcgtctcccccagaggcggatcttcatctgggccaaagctcccaccatcagccctctcat
acgctggttgttaaccaggagccacaggccctccttccactccaggacgactacactgtg
ggttctccctgctctgaaagccctgcagctgggctggagctgcccgtggggctcctggga
gatgcagtttcccgtacctcagtggaggacgggtcagactgcaccatgagtgcttctaca
gggtccgatcgggctgcctcgcctctgggctatgggggggtggtgaccctgcgtcagagg
aagaaggccggacaaggagccctgaggtttgtgcgacagtacccctttgccatacaagct
ctgtggtgcctgctgagtggcagaaccctggtggttctcggggcagatgaggggagagtc
cgtcggttggttgctgctctggccctctttgtgcctggccctgggaagtgtggagagagg
gttcaagcctggctgtcctgccctttcacccttactgacctgcagaggtggaaactcgtc
ggattgcaaagagtggcgtcccctgtgggttctagcatgctttactcgctgtcccgctac
agtcgctacatctccatcctcgacgccgaccagaagactttgcgctgcccgccgtatcgt
ggccaactgcttgccaacgtagccgaccaccgcacctacatccgccgtggctccacctac
ttccttcaagtacagagcaccctgtgtcgcatggcagccaaggccttcctgtttaccttc
acccaccacctccacctgccggtcagctccgcggaggggccggaggtggtggagggccga
cgccgctgcttcctgcaggagcagctggggctgggcgaggaggacagccagatactgctc
tacctcagccagctcgtcactcagcagtacctacagcctgccaccgggggcagcgcagca
gcagcaccttgttttagttttaactacaccaccagcgttttatacaaaatctaa
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