KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111647918
Entry
111647918         CDS       T06058                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04010  MAPK signaling pathway
slal04137  Mitophagy - animal
slal04141  Protein processing in endoplasmic reticulum
slal04210  Apoptosis
slal04217  Necroptosis
slal04621  NOD-like receptor signaling pathway
slal04622  RIG-I-like receptor signaling pathway
slal04920  Adipocytokine signaling pathway
slal05132  Salmonella infection
slal05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111647918
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    111647918
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    111647918
  09143 Cell growth and death
   04210 Apoptosis
    111647918
   04217 Necroptosis
    111647918
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    111647918
   04622 RIG-I-like receptor signaling pathway
    111647918
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    111647918
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    111647918
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    111647918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slal03019]
    111647918
   04121 Ubiquitin system [BR:slal04121]
    111647918
Enzymes [BR:slal01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111647918
Messenger RNA biogenesis [BR:slal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     111647918
Ubiquitin system [BR:slal04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    111647918
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-RING_4 zf-C3HC4_2 Sina_ZnF zf-RING_5 zf-C3HC4_4 zf-RING_6 MATH Tropomyosin TRAFD1-XIAF1_ZnF zf_C2HC_14 EFL1
Other DBs
NCBI-GeneID: 111647918
NCBI-ProteinID: XP_023253383
Ensembl: ENSSLDG00000012317
LinkDB
Position
Unknown
AA seq 569 aa
MAAQEPSPPSSLEGNKPGFPKKILANNLEDKHLCNSCQKILRRPLQAQCGHRFCSFCFNK
IVSSGPQKCSACIKEDLFEEPTSILKQGGAFPDNAARREVEALAAVCPNEGCTWTGTIKE
FEAGHEGNCDFMIILCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFKAPCRFHVVGCDTSVEKEKIHDHERQCS
YEHLNLLLHFIMGIKVSLESLQPQSLEVASHKLQELHQSLRDLEQKMSQLGGGGGAAPVQ
GACAPTLATSFTPLPSAMGAALELQLQSEKTKVAELSRRCQELELKVSTFENIVCVLNRE
MERSCTTMEAYNRQHRLDQDKIEILNNKVRQLERTVSLRDLSIVEMEGKMREMSAATYDG
IFVWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFV
VMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLF
CSLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggctgcgcaggaaccgtctccaccatcttccctggaaggcaacaaaccgggtttccct
aagaaaattttggccaacaacctcgaagacaagcatctgtgcaattcatgccagaagata
ctgagaaggcccctgcaggcccagtgtggtcaccgcttttgttcgttctgtttcaacaaa
attgtgagctccggaccacagaaatgcagtgcctgcatcaaagaagacttatttgaggaa
cccacctctattctcaaacaaggtggtgctttcccagacaatgcagctcggcgagaagta
gaggccttggcggctgtctgtcccaacgagggatgtacgtggacggggactatcaaagaa
tttgaggccggccatgagggcaactgtgacttcatgatcatcctgtgtccttcctgtaaa
gagctgatgagagccaacgagcaggaacgccacaacgagagagagtgtccagagaggacg
ctcaactgcaaatactgcaaagaacccttcttactgaagaacatcaaggctcatgatgaa
atctgtccaaagtacccaatgatttgtgaaggttgtgcaaagaaaaagatccccagagaa
aagtatgtggaccatattaagttctgcagtaaatttaaagcaccatgcagatttcatgtt
gttggctgcgatacgtctgtggagaaagagaagattcatgaccatgagcgccagtgttcc
tacgaacacctcaacctgctcctgcatttcatcatgggcatcaaggtgagcctggaaagc
ctgcagccccagagcctggaggtcgccagccacaagctgcaggagctccaccagtccctc
agggacctggagcagaagatgagccagctgggtggaggggggggtgcagctcctgtgcag
ggtgcgtgcgccccgaccctggccacctccttcaccccgctgcccagcgccatgggcgcc
gccctggagttacagctccagagtgaaaagaccaaagtggcggagctgagccggcgctgc
caggagctggagctcaaagtgagcacgttcgagaacatcgtgtgcgtcctcaaccgagag
atggagcgttcctgcaccaccatggaggcctacaaccgccaacaccgactggaccaggac
aagatcgagatcctcaacaacaaggttcgtcagctggagaggacggtgagtctcagagac
ctgtccatcgtggagatggaggggaaaatgagggagatgtctgcggccacgtacgacggc
atctttgtctggaagatctcagatttcaccaagaagagacaggacgccgtggccggccgt
gcccccgctatgttctctcctgccttttataccagtaaatacggctacaagatgtgcctg
cggatctacctgaacggcgatgggaccggccgcggcacccacctgtctctgttctttgtg
gtgatgagaggacacagcgacgcactcctcaagtggccttttaatcagaaggtcacccta
atgctgcttgaccagaacaacagggagcacataatcgacgccttccggcccgacatctcc
tcctcgtccttccagaggcccgtcagtgatatgaacatcgccagcggctgtccactcttc
tgttcgctctccaaactggactctaaaaactcctacatacgagatgacaccatattcatc
aaggccatcgtagacctcactggactctag

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