KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111649554
Entry
111649554         CDS       T06058                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111649554 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:slal03041]
    111649554 (smndc1)
Spliceosome [BR:slal03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111649554 (smndc1)
 Complex B
    111649554 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    111649554 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2730 PUA_4 RskA_C
Other DBs
NCBI-GeneID: 111649554
NCBI-ProteinID: XP_023255076
Ensembl: ENSSLDG00000017325
UniProt: A0A3B4Y2W7
LinkDB
Position
Unknown
AA seq 238 aa
MSDDLVKQLSSYKAQLQQVEVALSTDPDNEDLLKLQKDLQEVIDLTKDLLTSQPTDGASS
TNGSDTVPLKHGWKVGDRCMAVWSQDGQVYEAEIEEIDRENGTAAVTFSGYGNAEVIPLQ
NLKAAEEGRRSDEDGSMKPKSKKEQIAEQREYKKKKAQKKVQRMKELEQEREEQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagacgacttggtgaaacagctaagcagttacaaagctcagctgcagcaagtagaa
gttgctttatccaccgacccagacaatgaagacctccttaaactccagaaagacttgcag
gaagtcatcgatttgacaaaagacctcctgacctcacaacccactgatggtgcttcaagt
actaatgggtcagacacagtccccctgaaacatggctggaaagtgggggacaggtgtatg
gctgtgtggagtcaggatggacaggtgtatgaggctgagattgaggagatagaccgagag
aacggcactgcagctgttaccttcagtggatacgggaatgctgaagtgatccctctgcag
aacctcaaagcagcagaggaggggagacgctctgatgaggatggaagtatgaagcccaaa
tcaaagaaagagcaaatagcagaacagagagagtataagaagaaaaaagcccagaagaag
gtacagaggatgaaggagctggagcaagagagggaggaacaaaagtcaaagtggcaacag
ttcaacaacaaagcctactcaaagaacaagaaaggacaggtaaagaggagcatatttgca
tctccagaaagcgtaaatggaaaggtgggagtgggaacatgtggtattgcagacaagcct
atgacccagtaccatgacacatcaaagtacaatgtcagacatctaatgccccaatga

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