Seriola lalandi dorsalis (Yellowtail amberjack): 111650466
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Entry
111650466 CDS
T06058
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111650466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slal03400
]
111650466
Enzymes [BR:
slal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
111650466
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111650466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
AT_hook
Motif
Other DBs
NCBI-GeneID:
111650466
NCBI-ProteinID:
XP_023256142
Ensembl:
ENSSLDG00000003349
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MEENQYTSLTVPTDYFQQWYQSSQQHPEAQHVMPYHNMGHYTEDPRDEPVMAELSVHREP
PLYQEPFYQNYPAAPNHYQEPMYQQNVREQHQQQQQQQQQQHLAVLHHPQHHHNIQQQEL
SVQHQPQTAGPPPAVTPVKKKRGRPPKHQAEEGETQEEEDEAEAAKKAKRVLNRFNGMSV
AEVMAKTLPDVITYNLDILIIGINPGLLSAFKGHHYPNPGNHFWKCLFLSGLTEEQLNYM
HDQSLPEKYSIGFTNMVERTTPGSKDLSSKEIREGGRQLLDKLQKYKPLIAAFNGKGIYE
IFCKETFGVKAKNLEFGLQPYKIPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKLKELR
DQMKGLGPSHEVMETQYSFDLQLAKEDAKRIAIKEEQVDPEYESCSGLHHNARQSSNITN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaccagtacacatcattgacggttcctacggattattttcagcagtggtac
cagtccagccagcagcatcctgaggcacagcatgtgatgccatatcacaacatgggccac
tacacagaagatcccagagatgagcctgtcatggctgagctatcagtccatcgagagcca
cctctttaccaggaacctttttaccagaactatcccgcagccccaaatcactatcaagag
ccgatgtaccagcagaacgtcagggagcagcatcagcagcagcagcagcagcagcagcag
cagcatcttgcagtcctgcaccaccctcagcatcaccataacatacagcagcaggagctg
agtgtccagcaccagcctcagactgctggtccacctccagctgtgacaccagtgaagaaa
aagagaggccggcctccaaagcaccaagcggaggagggcgagacgcaggaagaggaggac
gaggctgaggccgccaagaaggccaagagggttctcaaccgctttaacggcatgtcagtg
gctgaggttatggccaaaaccctgcctgacgttattacctacaatcttgacattttgata
attggaattaacccaggactattgtcagccttcaaaggacaccattacccaaacccagga
aaccatttctggaaatgtctgtttctctctggtctgactgaagagcagctcaactacatg
cacgatcagagcctgccggagaaatacagcatcggcttcaccaacatggtggagaggacc
acacctggcagcaaggacctctccagtaaggagattcgagaaggaggtcgacagttactt
gacaagctgcagaagtacaagccattaatagcagcttttaatggcaaaggtatttatgaa
atcttctgcaaagaaacctttggtgtgaaggcaaagaatctggagttcggtctgcagccc
tacaaaatcccagagactgaaacagtgtgctacttgatgccctcatcaagccctcgctgt
gcccagtttccccgtgcgcaggataaggtgcatttctacatcaagctgaaggagctaaga
gaccagatgaaaggtttgggacccagtcacgaggtgatggagacacagtactccttcgac
ctgcagctggctaaagaggatgccaagaggattgcaatcaaagaagagcaggtggatcca
gagtatgaaagctgtagtggtctccaccacaacgcgaggcaaagcagcaacatcaccaac
taa
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