Seriola lalandi dorsalis (Yellowtail amberjack): 111654197
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Entry
111654197 CDS
T06058
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1F-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04010
MAPK signaling pathway
slal04020
Calcium signaling pathway
slal04260
Cardiac muscle contraction
slal04261
Adrenergic signaling in cardiomyocytes
slal04270
Vascular smooth muscle contraction
slal04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111654197
04020 Calcium signaling pathway
111654197
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
111654197
09153 Circulatory system
04260 Cardiac muscle contraction
111654197
04261 Adrenergic signaling in cardiomyocytes
111654197
04270 Vascular smooth muscle contraction
111654197
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slal04040
]
111654197
Ion channels [BR:
slal04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111654197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
111654197
NCBI-ProteinID:
XP_023260877
LinkDB
All DBs
Position
Unknown
AA seq
1653 aa
AA seq
DB search
MDAAKKDAPPGGDAGKSDTLGSTGSARKRGGGAKKAMQANKSALRAPRALCCLTLSNPIR
MAALALVEWKYPFSXPFDIFILLAIFANCVAMGVTKPYPDDDSNATNHKLEQVEYVFLVI
FTIETFTKILAYGLVMHPSAYIRSGWNLLDFVIVIVGLFSVIAEAMTDHKPGEAHHAAGK
PGGLDVKALRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIGMLVMFVIIIYAIIGL
ELFIGRMHKTCYFMSTGLMVEDDPSPCAFAGNGRFCVGNGSECRGKWEGPNGGITNFDNI
FFAMLTVFQCITMEGWTDVLYWMNDAIGHEIPWIYFVSLVIFGSFFIINLVLGVLSGEFS
KEREKAVARGELQKAQESKQMEEDMIGYMDWLIEAEDVDEEGNKRAAIAKKKMMKKFGWY
KHSEDGGESDSDDDIAYLDDDNGCCASLMAKMMANSFCDQLCQLNHTMRKNCRVAVKTTN
FYWLVLLLVFLNTVASASEHYGQPKWLTEMQERANKILLLLFTLEMLMKMYAFGLQIYFM
ALFNRFDCFVVCGGILETLLVEMEVIPPIGISVLRCIRLLRIFKMTRHWAALSDLVNSLL
NSMKAICSLLLLLFLFLIIFALLGMQLFGGKFNFDETQMKRSTFDSFPQALLTCFQILTG
EDWNAVMYDGIMAYGGPIFPNMVVCVYFVILFVCGNYILLNVFLAIAVDNLAGGGGKKDV
EEKKEEEEEWDEDEDKEDEDAGNEEDDWQENEELRAIEGLEGVAPLKPEFSGPKEKIVPI
PDGSSFFILGKKNWCLGGGGHGEGGSKGESGKVSITFFRLFRVLRLVKLLSKGEGIRTLL
WTFVKSLQALPYVGLLIAMIFFIYAVIGMQTFGKVAVDDDTHINRNCNFQTFFSAVLVLF
RCATGEQWQEIMLAALPGRRCDPESDTEPGEEFSCGSNLSYIYFISFFMLCAYLIINLFI
AVIMDNFEYLTRDWTVLGTHHLDEFKRVWSDYDPEATGRIKHIDVVTMLRRIQPPLGFGK
LCPHRVACKRLVAMNVPLHADGTVTFNATLFALVRTSLKIKTEGPIDQQNEELKLIIKKL
WKRTKPKLIDEVIPPPRGDEVTCGKFYASFLIQDYFKKFRKRKERERKSKRKDKAASLQQ
GLRTLQDLAPEMRLAMACDLEEEEAADGEMTGDEIFDSEAGTSATNTPASTPMPPIDMFM
EHTTVFVEPEPNIANGVVITEQVTGLEEHQRPGSELAGVSIVTEQPVRSGPLPIRMDSIT
ELPPPPTPDISVGGEVVAEEPVVVATPVAAEQPEQVYNSELDAAILASVDRYVYPEAVSP
EPTETGYNGQSLDRANSIGEIPYDTDMNGFISNGYNNTSMNGGSVATSPTPYNENGYNGN
GYAGYNENGSIISTNGNGSMVSGCHENGSTMSGYTGNGYSGNENSGSRFVRRRLLPAIPR
GHKPAFNFQCLRPQSSVDEPGNYTRSTSPSRSRLQVQHSLDSRPSSVSSMSSASWANTAA
AGTTPVPGIINPSGRRGKLIYTPMILVDDATGNSQPLWSDGSASLPVGSRPGWYPGQTRT
FTSVRMPPVNQGFVDKGSADSLVESILISEGLGVYARDPKFVSFAKREIAEACRMSLDEM
ENAAADLIARGASQSISRFEEELADEMNCVISY
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggcaaagaaagatgccccccctgggggcgatgcaggcaaatcagacaccctc
gggtcaactggctcggccagaaaaagaggagggggggccaagaaggcgatgcaggcgaac
aagtccgccctcagggccccccgagccctctgctgcctcaccctcagcaaccccatccgc
atggcagcactggccctagtggagtggaaatatcctttttcctgaccctttgatattttc
attctacttgccatttttgccaactgtgtggccatgggcgttaccaagccgtaccccgat
gatgactccaacgctaccaatcacaaactggaacaagtcgaatacgtcttcctcgtcatc
ttcaccatcgagaccttcactaaaattcttgcctacggcttagtcatgcaccccagcgcc
tacatacgcagcggatggaacttgcttgatttcgttatcgtcattgtcgggttgttcagt
gtgatagcagaggccatgacagatcataagccaggagaggcccatcatgctgcaggaaaa
cccggaggcctggatgtcaaagcactcagagcgttcagggtgttacgaccacttcgactc
gtatctggagtgccaagtttacaaattgtgttgaactccatcatgaaagccatggtcccc
cttctccacatcggtatgttggtcatgttcgtcatcatcatctacgctatcatcggcttg
gagctcttcatcggcaggatgcacaagacgtgctacttcatgagcacaggtctcatggtg
gaggatgacccttcaccctgtgcgtttgctgggaatgggcgcttttgtgtcggcaatggc
agtgagtgcaggggcaagtgggagggccccaacggcgggatcacaaactttgacaatatt
ttcttcgccatgctgactgttttccagtgcatcactatggagggctggacagacgtgctc
tactggatgaacgatgccatcggtcacgagattccatggatctattttgtttctcttgtc
atctttggatcatttttcattatcaatcttgtattgggtgtgttgagcggagagttctcc
aaagagagagaaaaggctgtggcgcgtggtgagctgcagaaggcgcaggagagcaaacag
atggaggaggacatgattggctacatggattggctcatagaggccgaggatgtggacgaa
gaaggaaacaaacgtgctgcaattgcaaagaaaaagatgatgaagaagtttggctggtac
aaacacagcgaggatggcggagagtcagactctgatgatgatatagcatacctcgatgat
gacaatggctgctgcgcttctctcatggcaaagatgatggccaatagcttctgcgaccag
ctgtgccagctgaatcataccatgaggaagaattgccgtgtggctgttaagaccacaaac
ttctactggctggtgcttctcctggtgtttctcaacacagtggccagtgcctccgagcat
tacggacagcctaagtggctcacagaaatgcaagagcgagccaacaagatcctgctgctg
ctgttcactctggagatgttgatgaagatgtacgcctttggcctgcagatctacttcatg
gcgttgttcaaccgctttgattgcttcgtggtgtgcggcggtatcctcgagaccctgctc
gtagagatggaggtcatcccgcctatcggcatctccgtgctgcgctgcatccgactgctc
aggatatttaagatgacgcggcactgggcggccttatctgacctggtcaactccctgctc
aactccatgaaagctatctgctccctgctgctcctgctcttcctcttcctcatcatcttc
gccttgctgggcatgcagttgtttggaggcaaattcaactttgatgagactcagatgaag
agaagtacctttgactccttcccccaggctctgctcacttgtttccagatactcactgga
gaggactggaacgctgtgatgtacgacggcattatggcctatggagggcccatcttccct
aacatggtggtgtgcgtttactttgtcatcctctttgtctgtggtaattacatcctgctc
aatgtcttcttggctatcgctgtggacaacttagcaggaggcggcggaaagaaagatgtc
gaagagaaaaaggaagaggaggaagagtgggatgaggatgaagataaagaagatgaggat
gcagggaacgaagaggacgactggcaggaaaacgaggagctgagggccattgagggatta
gagggagttgctccattaaagccagagttctccgggcctaaagagaagatcgtaccaatc
ccggatggaagctccttcttcattcttggaaagaaaaactggtgtttaggaggaggcggc
catggtgagggtggtagtaaaggagaaagtggaaaagtgtccatcaccttcttccggttg
ttcagagtgttgaggctggtcaaactgctcagcaaaggagagggtattcgaactcttctc
tggacttttgtcaagtccctccaggccctgccttatgtcggtctgctcatcgccatgatc
tttttcatctatgctgtgattggcatgcagacgtttgggaaagtggccgtcgatgatgat
acacatatcaacagaaactgcaacttccagactttcttcagtgcagttctggtgcttttt
aggtgtgccactggagagcagtggcaggagatcatgttggcagctctccccggcagacgc
tgtgacccagagagcgacactgaacctggtgaagagttcagctgcggtagcaacttgtcc
tacatctacttcatcagcttcttcatgctgtgcgcttacctgatcatcaacttgttcatt
gctgtcatcatggacaactttgaatacctgacacgagactggactgtgctcggtactcac
cacctggacgagttcaagagagtttggtcagactacgatccagaggccaccggtcgtata
aagcacattgacgtcgtcactatgctgcgaaggattcagccgcctctcggttttggaaag
ctgtgtcctcatcgtgttgcttgcaagagacttgttgctatgaatgtccccctgcacgct
gatgggacagtcaccttcaatgctacgctgtttgctcttgtgcgaacctcactgaagatc
aagactgaaggccccatcgaccagcagaatgaagagctgaagctgattattaagaagctc
tggaagcgcactaagcccaagctcatcgatgaagtcattcctccacctagaggtgatgag
gtgacttgtgggaagttttatgccagcttcttgattcaggactatttcaaaaagttccgc
aagagaaaggagagggagaggaaatccaaaaggaaggacaaggcggcttctcttcagcaa
gggctgcggacgctgcaggacctggctccagagatgcgtctggcgatggcctgtgacctg
gaagaagaggaagctgcggacggagagatgacaggtgatgagatattcgacagtgaggct
gggacctcagcgaccaatacgcccgccagcacgccaatgccgcccatagacatgttcatg
gagcatacgactgtgtttgttgaacccgagcccaatatagccaacggggtcgtgatcaca
gagcaggtgacgggcctagaggagcaccaaagaccaggatcagagctggcaggtgtcagc
attgtaacggaacagcctgtgaggtctgggcccctgcccatcaggatggactccatcact
gagttgcctcctcctcctaccccggacatatcagttggaggagaggttgtggctgaagag
ccagttgtggtggctacacccgtagcagcagagcagccggagcaggtttataacagtgaa
cttgatgctgcaattctagcatcagtagacaggtacgtttatccagaagctgtttctcct
gaaccaactgagactggctacaatggacagagcctggacagagctaacagcattggggag
ataccctatgacactgatatgaacggcttcattagtaatggttacaataacaccagcatg
aatggagggagcgttgctacaagccccaccccctataatgaaaatgggtataacgggaat
ggatacgcaggctacaatgagaacggcagcatcatcagcaccaatggtaatggaagtatg
gtgagcggctgccatgaaaatggcagcactatgagtggttatactgggaatggctacagt
gggaatgaaaacagcggctcacggtttgtcaggagacgactacttcctgccatacccaga
ggtcataagcccgcctttaacttccagtgtctgaggcctcagagcagtgtggacgagcca
ggaaactatacgaggagcacatccccgtccagatcccgactacaggtccagcacagtctg
gactcccggcccagcagcgtgtcctcaatgtcgtccgcctcgtgggcaaacacagcagca
gctggcaccactcctgttccaggaataatcaacccctcagggcgcaggggcaagctcatc
tacactcctatgatcctggtggacgatgccaccggcaacagccagccgctgtggagcgac
ggctccgccagcctccctgtagggagccgtcccggctggtaccccggtcagacaaggacc
ttcaccagcgtcaggatgccgccggtcaaccagggcttcgtagacaaagggagtgcagac
agtctggttgagtcgatcttgatctccgagggtctcggcgtctacgccagggacccaaag
tttgtgagctttgccaagcgagagattgctgaggcctgtcgcatgagcctggacgaaatg
gagaacgctgctgctgacctgatagcccgcggagccagtcagtccatttctcggtttgag
gaagaactggccgatgaaatgaactgtgtgatttcttactga
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integrated database retrieval system
