KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111656499
Entry
111656499         CDS       T06058                                 
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
  KO
K02084  apoptotic protease-activating factor
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04115  p53 signaling pathway
slal04210  Apoptosis
slal05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:slal00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    111656499 (apaf1)
   04115 p53 signaling pathway
    111656499 (apaf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    111656499 (apaf1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz APAF1_C WDR55 WD40_MABP1-WDR62_2nd EIF3I NB-ARC Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd APAF-1-like_WHD Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th CARD NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st RMC1_N Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_NWD2_C eIF2A Ge1_WD40 WD40_like Beta-prop_Vps41 CARD_2 Beta-prop_SPT8 WD40_RFWD3 AAA_16 AAA_22 Dark_WHD AAA_18
Other DBs
NCBI-GeneID: 111656499
NCBI-ProteinID: XP_023264002
Ensembl: ENSSLDG00000020771
UniProt: A0A3B4Y7B0
LinkDB
Position
Unknown
AA seq 1258 aa
MTMEEGARSCLLRFRHRLEQDIKPPYLMDHMISDGVMSVDEEERIRTQPTRKEQAVAMLE
LLLRKDNRAYISFYNALVKEAYDDLANLLHDDLPQISPNAHKNTSDGLTSYVQTMLSEGG
VPQRPVVFVNRPELLNRVREKLYRLLKDPGWVTVFGMAGSGKSVLAAEAVRHHGVIEECF
PGGIHWLSIGQLDKPDLLVKIQSLCFRLEQSLDSQCLHRPPNSLDEAKERLRFLMLRKYP
RSLLILDDVWDSTVLKVFDIHCRIILTTRNRSLTDSVSGAKYEVEVESGLDESKGLEILA
LYTKTKPQGLPEEARCIVRECKGSPLVVSLIGALLKEKPNRWRYYLCQLQQKQFKRIRKS
SSYDYDALDQAMAASIEVLPDEHRELYKDLTVIEKDIKIPAKVLSVLWDLETEEVEDILE
EFVNKSLLFVDCHNKPCLYYLHDLQLDFLVEQNRTQLECLHAKVVHQYQQHYRDGPPTSG
DEECLYWIRFLTYHMAKANLSQELYSLMFSLDWVSIKSQIMGPAHLINDYVEYGPILDKE
NSEVRSQFQEFLSLNGHQLEQRPFPDVVQLALSQPQTSEVYRQALQQAQDGASTGKLYFD
WLNKSSVESLSRLVIHPHQGPIYSACFSHDGAKIATCGASKTLKVFKSTSGEKLTEIQAH
DDEVLCCAFSPDDRLLATCSSDRKVKVWNVERAMLLRVFAEEHEEQVNHCQFTNTRRKVL
LATCSNDKVMNVKVWNLNKPTCQNTMFGHFEPVNHCCFSPDDTYVSTSSNDGTVKLFQAS
SGNEWKTINVSSMFTESDEEVFVKCSTWTADGKHIICAARNAVLVFDVETSDMLLEIRTN
RLSTVQYCHACPTSNLLAIAFSNYAVELWDLEANKKMADCSGHLSWVHRVQFSPDGSQLL
SCSDDQTVRLWETKKVHTSSAVCLKRDSAVLFTDEEIIVSAADNCNRLQVRDGKTGSVLF
QSEEKSSRIRCTCMCRQPPAVALGQEDGTVQVLEVPSGKLLATLLGHTKTVLHCQFSQNG
QTLITSSEDTTIRVWRWQSGEVRALQGHKEQVRCFSLLSSSPSDTRLLSWSFDGTVKVWD
AESGEKLQDIEAHQGAILSCHVSPDGCFFATTSADKTAKLWHYESWQCVHTLSGHQDCVR
SCRFSWDSRRLATGDDNGEIRLWSVSEGSLLKICSRDGKDGMDSLHGGWVTDVHFSPDNS
LLVSTGGYIKWWDVEKGEALQTFYPTGSALKRIHVSSDFSTFVTIDSIGILYILQRVV
NT seq 3777 nt   +upstreamnt  +downstreamnt
atgacgatggaggaaggggcacggagctgtctgctgcgctttcgccacagactggaacaa
gacatcaagcccccgtacctgatggaccacatgatcagtgatggtgtgatgagtgtggat
gaggaggagaggatcaggactcagcccaccaggaaggaacaggctgtggccatgctggag
ctgctgctgaggaaggacaaccgtgcctacatctccttctacaacgccctggtcaaagag
gcatatgatgatttggccaatctgcttcatgatgacctaccacagatctcaccaaatgca
cataagaacacctctgatggcttgacatcttatgtccagacgatgctaagtgaaggtggt
gtaccacagaggcctgtggtgtttgtcaaccgaccagagcttttgaaccgggtcagggag
aaactctatcggctgctgaaggaccctggctgggtcactgtcttcgggatggctggctcg
ggcaaatctgtcctggctgcagaggctgtcagacaccatggggtcattgaagagtgcttt
cctggaggcatccactggttgtccatcggccagctggacaaaccagacctgctggtgaag
atccagtcattgtgtttccgtttggagcagagcctggactcccagtgcctccaccggcct
cccaactctctggatgaagccaaggagcggctacgcttcctcatgctgcgcaaatatcca
agatctctgctgattctagatgacgtctgggacagtacagtactgaaggtgtttgacatc
cactgtcgaataattctgaccaccagaaatagaagcctcactgattcagttagtggtgct
aaatatgaggtggaagtggagagtggtctggatgaaagcaaaggactggagatcctcgct
ctttacactaaaactaaaccacaaggactacctgaggaagctcgctgcattgtgagagaa
tgtaaaggctcccctctggtcgtgtccttgatcggggctctgctcaaagagaaacccaac
cgttggcgttactacctctgccagctgcagcagaagcagttcaagcgtatacgaaagtca
tcatcttatgactatgacgccctggaccaagccatggcggcaagcattgaggtcctgcct
gatgaacatcgagagctctacaaggacctcactgtgatagagaaggacattaaaatccct
gctaaggtgctgtctgttctgtgggacctggagacagaggaggtggaggacattctcgag
gagtttgtcaacaagtccctgctttttgtagactgtcacaataaaccctgcctatattac
ctccatgacctccagctggacttcctggtggagcagaaccgcacccagctcgagtgcctt
cacgctaaagtggtgcatcagtatcagcagcactacagagatggtcctcccacctcagga
gatgaagagtgtctttattggatcagatttttgacctaccacatggccaaagccaacctg
tctcaggagctctactccctcatgttttcactggactgggtcagcatcaagtcccagata
atgggtccagctcacctcatcaatgactatgtggagtatggaccaattctggacaaagag
aacagtgaagtgcgcagtcagttccaggagtttctgtctctgaacggccaccagctggag
cagcgtcctttccctgacgtggtgcagctagctctgtctcagccacaaacctctgaggtc
tacagacaggctctgcagcaggcacaggacggcgccagcacagggaaactctactttgac
tggctgaataagagcagtgtagagagtctgtctcgtctagtgatccacccccaccagggc
cctatctactctgcctgcttctcccacgatggagccaagatcgccacctgtggagccagc
aagacactcaaggtgtttaaaagcacctcaggagagaaactcacagagatccaggcccac
gacgatgaggttctctgctgtgccttctcccccgatgaccgtctcctagcaacctgctct
agtgacaggaaagtaaaggtgtggaatgtggagcgcgccatgctgctgcgggtgtttgcc
gaggagcatgaagagcaggtcaaccactgtcagtttacaaacacaagacgaaaagtcctc
ctggccacctgctccaacgacaaggtcatgaatgtcaaggtgtggaacctcaacaagcca
acctgccagaacaccatgtttggccactttgagccagtcaaccattgttgtttctcccct
gatgacacatatgtgtccacttcctccaacgatggcactgttaagctgtttcaggcgtcg
tctggcaatgagtggaagacaatcaatgtgagcagcatgttcacagagagcgatgaagag
gttttcgtcaagtgcagcacctggactgctgacggcaaacacattatatgtgctgccagg
aacgctgttttggtgtttgacgtggagacgtcggacatgttgttggagatcagaacgaat
cgcctgagcacggtgcaatattgtcacgcctgtcctaccagtaatctgctggccattgca
ttctctaactacgctgtggagctgtgggacctggaggctaataaaaagatggctgattgc
agtgggcacctaagttgggtccatcgtgttcagttctctcctgacggctcgcagctgctc
tcctgctctgacgaccagactgtcaggttatgggaaactaagaaggttcacacgtcctca
gccgtctgcctgaagagagactccgccgttctcttcactgatgaagagatcattgtatct
gctgcagacaactgcaatagactgcaggtgcgtgatggcaagacgggatccgtgttgttc
cagtcagaagagaagtcttctaggattcggtgtacctgtatgtgcaggcagcctcctgca
gtggctctgggccaagaagacggcactgtacaggtgttggaggtgccctctgggaagctt
ctggccactctgctgggacacaccaagacggtgctgcactgccagttcagccagaacggc
caaacactcatcacatcctccgaagacaccaccatcagggtgtggaggtggcagtctggg
gaggttagagcgcttcaaggtcacaaagagcaggtcagatgcttctccctgctctccagc
tcaccatccgacacaagactcctgtcctggtccttcgacgggactgtcaaggtgtgggat
gcagaaagtggagagaagctacaggacatcgaggctcatcagggagccattctgtcctgt
catgtctcaccagacggatgcttcttcgcgactacctctgctgacaagactgctaagttg
tggcactatgagtcctggcagtgcgtccacacactgagcggccatcaagattgtgtccga
agctgccgattctcctgggacagccgacgcctcgcaaccggagatgacaacggagagatc
aggctctggagtgtcagtgaaggctctttgctgaagatttgttcgcgagacggtaaagac
ggtatggactcactccacggaggctgggtgactgacgtgcacttctccccagacaactct
cttctggtttctactggcggctatatcaagtggtgggatgtggagaaaggcgaggcgctg
cagaccttctacccaacgggaagtgctttgaagagaatccacgtgtcatccgacttctcc
accttcgtcaccatcgacagcatcggcatcctctacatcctccagagggtggtgtga

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