Seriola lalandi dorsalis (Yellowtail amberjack): 111657270
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Entry
111657270 CDS
T06058
Symbol
arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04270
Vascular smooth muscle contraction
slal04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
111657270 (arhgef1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
111657270 (arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111657270 (arhgef1)
Membrane trafficking [BR:
slal04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111657270 (arhgef1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
Motif
Other DBs
NCBI-GeneID:
111657270
NCBI-ProteinID:
XP_023265129
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MDAEDAHFGQGVFGAQCSNPAMSIIGAEDEDFENDLNDAVEEQCALFDHIDLLKERPTHL
LIFMQHVFLQFDPAPMLCYLHADLFRTLSAKETKKQFVEFYNTFLDKGAILRVTVPLTVS
SELDRTRPDLLPEETQRRFAQDVQQMQASEVAKQLEDFRQKRKMGMTPNEAELVDVENHY
PTDRIPVEMKEKSVAENLLDKMSETQPTIVSDEEKCQSIFSAVAFYMKHLGVKTRAVDSK
KSRGGFFRRQLVKNKKDESTKAKPRGVFPGISWIAGSTEVKPKMEAEVEKEKVTQERKGP
APSRGSLTDPAALSLPSRKSGSSGGPASLPGLEVTDGSGNNISATNSPESSHSDGLSSNR
LEPSTVSDGGDVSPVVLAGALTIGEPASPNDTPTEENPEKDRRKTSRKVIRSESARVDRH
SSRRRGSSRAKQSRSRSDVDLQPLSTTTTSPAPLTPQHLHPVEGPVLFPEGPGQSPTSPS
PQLEEVEPRFLEFEQDPTNWRELASPEALSKLNKKETKRQEVINELFATEHAHVRMLSVL
QMVFSKPLEREALLSTTELAAIFPNLDEIIDMHYNFYENLKKLRGDDNFIVRSISPTVLN
RFGGTEGEWFQKLTARFCSHQSWALDQIKSRQKSHPRFNSFILEAESKPQCRRLQLKDII
PIEMQRLTKYPLLLENIAKSTEDLEEKEKIQQSAECCRKILNHVNEEVKEMENLLTLKDY
QRRLDTSGLKPSNELYTEYKNIDLTQKKMLYEGAVTWKVTKEKAIEVQCVLLGDMLVLLQ
RQDDKMVLKCQSKSNIAVQEGKQMLSPIIKLDSVFLREVATDRKAFYVIFTWDSGAQIYE
LVAQSVVERKTWTEVIKTAVDDLKKSGTPMRLTLPPGGGGAPFSPSSLTAPLSPTENGGS
KNISDQDKDSLTDEKSSDPRHRLIDFLSYNGFDLIGHSNSNQEKVAVSALDEVMLLKRLL
IGSISLSEDSQPDEENGEEQSQRPSQEMDSCQSTEESQTTDRGAEEKSDNTCEKEGAGTK
GEEERSISAPLVLSQERMDEVRRRLCSLEEHLKRLQFVEEEHHRLQEALSKFSLEGGNFQ
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgaagatgcccacttcgggcagggtgtgtttggggctcagtgctctaaccca
gccatgagcatcattggggctgaggatgaggatttcgagaatgatctgaacgatgcggtg
gaagaacagtgtgcactctttgaccatatagatttgttgaaggaacggccaacccacctg
ctgatcttcatgcaacatgtctttctacagtttgaccctgctcccatgctgtgttacctc
catgctgacctcttcaggaccctcagtgccaaagagaccaagaagcaatttgtggagttc
tacaacaccttcttggacaagggtgcaattctcagagtgacagtaccattgactgtgtcc
agtgagttggaccgaacccgtccagatctgctccccgaggaaacccaaagacgctttgcc
caggatgttcagcaaatgcaggcttctgaagtggccaaacagctggaggacttcaggcag
aagaggaagatgggtatgacccccaatgaggctgagctggtcgacgtggagaaccactat
cccaccgaccgcatcccggtggagatgaaggagaagtctgtggccgagaacctgctggac
aaaatgtctgagacacaaccaacaattgtctcggacgaggaaaaatgccaatccatcttt
tcagcggtcgccttctacatgaagcaccttggggttaaaaccagggcagttgacagtaag
aagtccagaggaggtttcttcaggagacaactggtaaagaataagaaagatgaatccacg
aaggccaagcccaggggggtgtttcctggcattagctggatcgctggcagcactgaggtc
aaacctaaaatggaggctgaagtggaaaaggagaaagtgactcaggagcgtaagggtcca
gctcccagcagaggctccttgaccgaccctgcagccctttccctacccagcaggaagtct
ggttccagcggaggccccgcctccctacctggcctagaggtcactgatggctcaggcaac
aacatcagcgccaccaacagccccgagtcttcacacagtgatggcctctcgagcaatcgc
ttagagccttcgaccgtgtcagatgggggcgatgtgtcccctgtcgtgctggccggcgcg
ctgaccattggggagcccgcctcccccaacgacactcccacagaggagaacccggagaaa
gacagacggaagacaagtaggaaagtgattcgtagcgagagtgctcgcgtggaccggcac
tcatctcgtcgccgtggctcttccagggccaaacagtcccgctcccgtagtgatgtggat
ctccagccgctttctaccacgacaacatcacctgccccgctcaccccccagcacctccat
cctgtcgagggaccggttttatttcctgaagggcctggccaatccccaaccagcccttcc
ccacagctggaggaggtggagccacgcttcctggaatttgagcaggacccgaccaactgg
agggagctggcctcccctgaagctttgtccaaactcaacaagaaggaaaccaagaggcag
gaggtcatcaatgagttgttcgcgacagagcatgcccacgtgcgaatgttaagtgttctt
cagatggtcttctctaagcctttggagagagaggcgctcctgagcaccactgagcttgct
gccatcttccccaacttggacgagatcattgacatgcactataacttctatgagaacctg
aagaaactgcgtggggatgacaacttcatagtcagatccatcagccccacagtgctcaac
aggtttggcggcacagagggggagtggttccagaaattgacagctcggttctgcagtcac
cagtcatgggccttggaccagatcaagagcaggcagaagagccatccacgcttcaactcc
ttcatactggaggcagagagtaagccccagtgtcgcaggctgcaactcaaggacatcatt
cctatagagatgcagagactgaccaagtacccattgctgctggagaatattgccaagagc
acagaggacctggaggagaaggagaagatccaacagagcgcagagtgctgcagaaagatc
ctcaaccatgtcaatgaggaggtcaaagagatggagaacctattgactctgaaggactac
cagcgtagattggacacatcagggctcaaaccaagtaatgagctttatactgaatataag
aacattgacctgactcagaagaagatgctttatgaaggtgctgtgacctggaaagtcaca
aaagagaaagcaattgaggtgcagtgtgtgctgctaggggacatgctggtcctcctacag
aggcaggatgacaagatggtcctcaaatgccagagcaagagtaacatcgccgtgcaggag
ggcaagcagatgctgagccccatcatcaagctagactcggtctttctccgcgaggtggcc
acagatcgaaaggccttctacgtgatatttacctgggatagcggtgctcagatctatgag
ctggtggcccaatctgttgtagagaggaaaacctggactgaggtgataaagactgcagtg
gatgatctgaagaagagtggaacacccatgaggttaacgctgcctcctggaggtggagga
gctcctttcagtccctcctcgctgactgcgcctctgagcccgactgagaatggaggttcg
aaaaacatcagtgatcaagataaggacagcttgacggatgaaaagtcttcagaccccagg
cacaggctgattgatttcctgtcatacaatggcttcgacttgataggccactccaacagc
aatcaggagaaggttgccgtcagtgctttggatgaagtcatgttactgaaaaggctgctg
atcggcagcatcagcctatcagaagactcacagcctgatgaagaaaacggagaggagcaa
tcacagaggcccagtcaagaaatggatagctgtcaatcaacagaagaaagccagaccaca
gacagaggagcggaggagaagagtgataacacttgtgaaaaagagggtgcagggacgaaa
ggagaggaggagagaagcatcagtgcgcccctggtgttgtcccaggagaggatggatgaa
gtgcgcaggaggctctgcagtctggaggaacatctaaagagattacagtttgtagaagag
gagcaccacaggctgcaggaggccctttccaagttctccctggagggaggcaacttccag
taa
DBGET
integrated database retrieval system
