Seriola lalandi dorsalis (Yellowtail amberjack): 111657521
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Entry
111657521 CDS
T06058
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slal04040
]
111657521
Ion channels [BR:
slal04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
111657521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
111657521
NCBI-ProteinID:
XP_023265493
Ensembl:
ENSSLDG00000011743
LinkDB
All DBs
Position
Unknown
AA seq
1823 aa
AA seq
DB search
MMSRKMSYFEFWRSNKERGALLKRANQLRIPPSQLRQLLGDSGIRAVLHDARMAPLLPPL
GSEVFRRFTQASLEEIQRRYEAEEKERQRKKEKNIEIAEEDLPKPASDLEAGKPLPFIYG
DPPPELLNTPLEELDPFYQSQKTFIVLSKGNIIYRFNADPACYTLSPFSRLRTIAIRILI
HSLFSLFIMVTILTNCAFMTMSDPPAWSKTVEYVFTGIYTFEATVKVLSRGFCVGDFTFL
RDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK
LADVMILTVFCLSVFALIGLQLFMGNLRQKCVLMPQQLRNHTPDVSLNISYHGNNTYGND
TGSGDFVFYEYINNPGNYYYLPGQLDALLCGNSSDAGVCPEGYVCLKVGRNPNYGYTSYD
SFGWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAY
AEQNEATCAEAKQKEEEYAEILEALKRREEEQATCRATPSQNPDSTHPPVDGQEVEQEHT
AMEDFEDDQRPCPPCWYSFADIFLKWNCCGCWRWLKIRLYTIVMDPFFDLGITICIVLNT
VFMAMEHYPMTDQFEELLSVGNLVFTGIFTAEMVLKLLAMDPYYYFQVGWNIFDSIIVTM
SLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF
IFAVVGMQLFGKNYKDCVCRISGDCELPRWHMNDFFHAFLIIFRILCGEWIETMWDCMEV
SGQTMCLIVFMMVLVIGNLVVLNLFLALLLSSFSGDNLAAPEDEGENNLQIAINRINRAV
AWIKSWILEQIWTVLGKKRHVNPDHIVDGDDNDTKEVLHLTFVTSDQPVSEVNALGCSHD
NLSSNYHNITFLKVPIAESESESESESESESDFETPENEDEEEDEEEDKKEKLSKGEESS
TCSTVQKLPEVQEEEDDEDQDTNTPEDCCTDNCYRRCPRLDIDTSQGRGKVWSNFRRTCF
SIVEHNYFETFIIFMILLSSGALAFEDIYLEQRRVIKIVLEYADQVFTYVFVVEMILKWI
AYGFKIYFTNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEG
MRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNETSEEMFHPADINN
KTECFALINENFSEVRWKNLKVNYDNVGMGYLSLLQVATFKGWMDIMYAAVDSREVEDQP
VYEGNLYMYLYFVCFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGTDIFMTEEQKKYYNAM
KKLGSKKPQKPVPRPDNKFQGLVFDLVTKQFFDIFIMVLICLNMVTMMVETDEQSLEKET
ILYWVNLVFIIVFTTECSLKIIALRQHYFAVGWNIFDFVVVILSIVGLLLADLIEKYFVS
PTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN
FAYVRKEAMIDDIFNFESFGNSMICLFMITTSAGWDGLLSPIMNTAPDCDPDIENPGSMV
RGNCGSPAVGIVFFTTYIIMSFLVVVNMYIAIILENFNVATEESTDPLCEDDFEMFYETW
EKFDPDASQFIQYSKLSDFCDTLQDPLRIPKPNTIKLIHMDLPLVPGDKIHCLDILLALT
AQVLGDSGAMDTLKASMEEKFMANNPSKVSYEPISSTLRRKQEEVAAMVIQQAYRKHLLR
RTVKLASYKYREKTDRRRDEDSPPETEGLLFKRISQLYGDSQDTEEQPPPARVELQSELL
LHATPPLSTPDFLQDENLRESIV
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcagaaaaatgtcatattttgagttttggaggagcaacaaggagagaggagct
ctgctgaagagagccaatcagctgagaattcctccctcacagctgaggcagctgctaggt
gacagtggaattcgggcggtgctgcatgatgccaggatggcgcctctgcttccccctctt
ggttcggaggtcttcagacgcttcacgcaagcctcgctagaggaaattcaacgacgatat
gaagccgaggagaaggagcgacagaggaagaaagagaagaacatcgagatagcagaagaa
gatcttcctaaaccagcaagtgacttggaggccggcaagcccctcccatttatctatgga
gacccgccccctgagcttctcaacaccccattggaggagctggatcccttctaccaatca
cagaagacattcatcgtgctcagtaaaggaaacatcatctacaggtttaacgcggacccg
gcctgctacaccctgagtccattcagtcgtctgaggaccatcgccatcaggatcctgatc
cactctttattcagtttgttcatcatggtgacgattctgaccaactgtgcgttcatgacg
atgagtgatcctccagcatggagcaagactgtggagtacgtcttcacaggcatctacacg
tttgaagcgacggtcaaagttctctcccgaggattctgtgtgggagatttcaccttcctc
agagacccctggaactggctggatttcatggtcatcagcatggcgtatcttacagagttt
gtagacttggggaatgtttctgcgttgagaacattcagagttctccgagccctgaagacc
atcacagtcatccccggtttaaagactattgtgggagctctcatccaatcagtcaagaag
ttggctgatgtcatgatcctgacagtgttctgcctcagtgtctttgccctgattggtctg
cagctcttcatgggaaacctgagacagaagtgtgtcctgatgccacaacagcttcgtaac
cacacacctgacgtcagtctcaacatcagttaccatggcaacaacacctacggcaatgac
acaggaagcggtgactttgttttctatgagtacatcaataatccagggaactactactac
ctgcctgggcagctcgatgctctactctgtggaaacagctctgatgccggggtctgtccc
gagggttatgtctgtctaaaggtggggagaaatccaaactatggctacaccagctacgac
tcttttggttgggcattcctggctctgttcagactgatgacccaggacttctgggaaaac
ctcttccagctgacactacgagcggcaggtaaaacctatatgattttcttcgtggtcgtc
attttcctcggctcgttctacctcattaacctgatcctggctgtggttgccatggcgtat
gccgagcagaacgaggccacgtgtgccgaggccaaacagaaggaggaggagtacgccgag
atcctggaggcgctgaagaggagagaggaggagcaggcaacctgcagggctacaccctcc
cagaatccagactcaacacacccacctgttgacggacaggaagtcgagcaagaacacact
gctatggaagactttgaggatgaccagagaccgtgtcctccatgttggtattcctttgct
gacatcttcctgaagtggaactgctgtggttgctggcggtggctcaaaatacggctctac
accatcgtcatggacccattcttcgaccttggcatcaccatctgcatcgtcctcaacacc
gtcttcatggccatggagcactatccaatgacggatcagtttgaggagctactgagtgtc
ggaaacctggtcttcacagggatcttcacagcagagatggtgctcaaacttctggccatg
gacccgtactactacttccaggtggggtggaacatctttgacagcatcatcgtaaccatg
agtctggtggagctgggattggctaacgttcagggcctgtctgtgctgcgctcattccga
ttgatgcgtgtctttaagctggccaagtcttggccgaccctcaacatgctgatcaagatc
attggaaactcggtgggggctctggggaacctgactctggtcctcgccatcatcgttttc
atcttcgccgtcgtcgggatgcagctgtttgggaagaactacaaagactgcgtctgtcgc
atctcgggggactgcgagcttcctcgctggcacatgaatgacttcttccacgccttcctc
atcatcttcaggatcctgtgtggagaatggatcgagaccatgtgggactgcatggaggtc
tcgggtcagaccatgtgtctgattgtgttcatgatggtcctggtcattggaaaccttgtt
gtcctgaacctgttcctggccttgttgctgagctcattcagcggtgataatctggcagct
ccagaggatgaaggtgaaaacaacttgcagatcgccataaatcggatcaacagggccgtg
gcctggatcaagtcctggatcctagagcagatttggactgtcttgggaaagaagaggcat
gtcaacccagaccacattgtcgacggtgacgacaacgacacaaaggaggttttgcatttg
acctttgtgacctcagaccagccagtgtcagaggtcaatgccctcggctgtagccacgac
aacctgagcagcaactaccacaacatcaccttcctgaaggtgcccatcgcggagtccgag
tcggagtctgagtccgagtcggagtctgagtccgactttgagacacctgaaaatgaagat
gaagaagaggatgaagaggaagacaagaaagaaaagctttccaaaggtgaagagtcgtca
acctgcagcacagtacagaaacttcctgaagtccaagaggaagaggacgatgaagatcag
gatactaatacacctgaggactgctgcactgacaactgttaccgtcgctgcccgcgcctg
gacatagacacatcccagggcagagggaaggtctggtctaacttcaggagaacctgtttc
tccattgtggaacacaactactttgagaccttcatcatcttcatgatactgctcagcagc
ggagctctggcatttgaggacatctacctggagcagcgtcgggtcataaagattgttctg
gagtatgcagaccaggtattcacctacgtgtttgtggtagagatgattctcaagtggatc
gcctacggattcaagatctacttcaccaacgcctggtgctggctggacttccttattgta
gacgtgtctctagtgtctctgacagccaacatcctgggatactctgagctgggagccatc
aagtctctgaggactctaagagctctgaggcctctgagggccctgtcccgctttgagggc
atgagggtggtggtgaatgctctggttggagcgatcccctccatctttaacgtgctgctg
gtgtgtctgatcttctggctgatcttcagcatcatgggagtgaatttgtttgcaggaaag
ttttattactgtttcaatgagacgtcagaggagatgtttcaccctgcggacatcaacaac
aagaccgagtgtttcgctctgatcaatgaaaacttctctgaggtccgctggaagaacctg
aaggtcaactacgacaatgtgggaatgggctacctgtcgctgctgcaagtggccacattt
aaaggctggatggacatcatgtacgctgcagtggactccagagaggtggaggaccagccg
gtgtacgagggtaacctgtacatgtacctgtacttcgtctgtttcatcatctttggctcc
ttcttcaccctcaacctcttcatcggagtcatcatcgacaacttcaaccagcagaaagcc
aagttgggaggaacagatatcttcatgacagaggagcagaaaaaatattacaatgccatg
aagaaactgggctctaagaaacctcagaaacctgttccacgacctgataacaagttccag
ggtctggtctttgacttggtcactaaacagtttttcgacatcttcatcatggtgttgatc
tgcctcaacatggtgaccatgatggtggagacggacgagcagagcctggagaaagagacc
atcttgtactgggtcaacctggtcttcatcatcgtcttcaccactgagtgctctctaaag
atcatcgcactcaggcagcactactttgccgttggctggaacattttcgactttgtagtg
gtcatcctgtccattgtaggccttctcctcgctgacctcatagagaagtattttgtttcg
cccactctctttcgtgtgatccgattggctcgtatcggtcgaatccttcgtcttatccga
ggagctaagggaatccggacgcttctgtttgccctgatgatgtcacttcctgccctcttc
aacattggtctgctcctcttcctcatcatgttcatcttctccatcttcggaatgtcaaat
tttgcctatgtgaggaaggaggccatgatagatgacatttttaactttgagagctttggg
aacagcatgatctgtttgtttatgatcaccacatcagccggatgggacggcctgctgagt
cccatcatgaacacagcgccagactgtgacccagacatcgagaaccctggatcaatggtg
agagggaactgtggcagcccggcggtgggcattgtctttttcaccacctacattattatg
tccttcctggtggtggtcaacatgtacatcgccatcatcctggagaacttcaacgtggcc
acagaggagagcaccgacccgctgtgtgaggatgactttgagatgttttatgaaacctgg
gagaagtttgaccccgatgcctcacagtttatacagtacagtaaactgtcagacttctgc
gacactctccaggatcctctgaggattcccaaacccaacaccatcaaactgatccacatg
gatctgcctctggttcctggagacaagatccattgtcttgacattctgctggcactcact
gcacaggtgttgggggattcaggagcaatggatacactcaaagccagcatggaggagaaa
ttcatggctaacaacccctcaaaggtgtcttatgaaccgatcagcagcaccctgcggaga
aaacaggaggaggtggcggcgatggtgatccagcaagcgtacaggaaacaccttcttcgg
cggacggtcaaattggcatcttacaaataccgcgagaagacagatagacggcgagacgag
gattcgcccccagagacagaaggacttctctttaaacgaatcagtcagctgtatggagac
agccaggacacagaggagcaacctcctccagcccgagtggagcttcagagtgagttactc
ctccatgccactcctcccctgagcacccccgactttctgcaagatgagaacctgagggaa
tcgatcgtgtga
DBGET
integrated database retrieval system
