Seriola lalandi dorsalis (Yellowtail amberjack): 111658714
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Entry
111658714 CDS
T06058
Name
(RefSeq) interferon regulatory factor 3-like
KO
K05411
interferon regulatory factor 3
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04620
Toll-like receptor signaling pathway
slal04621
NOD-like receptor signaling pathway
slal04622
RIG-I-like receptor signaling pathway
slal04623
Cytosolic DNA-sensing pathway
slal05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111658714
04621 NOD-like receptor signaling pathway
111658714
04622 RIG-I-like receptor signaling pathway
111658714
04623 Cytosolic DNA-sensing pathway
111658714
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111658714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slal03000
]
111658714
04131 Membrane trafficking [BR:
slal04131
]
111658714
Transcription factors [BR:
slal03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
111658714
Membrane trafficking [BR:
slal04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
111658714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
111658714
NCBI-ProteinID:
XP_023267113
Ensembl:
ENSSLDG00000010554
UniProt:
A0A3B4XB40
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MSHSKPLLIPWLRTQVDSGRYPGVNWTNPERTEFSIPWKHALRQDSSDTDILIFKAWSES
SNNGQAQGDPSVWKRNFRSALRAKGFKMVTDNKNDPANPHKVFRWPEEVTSEANSSAGSQ
DKDDFDLFEDCVLPTQESQVIPCFDDCLYLPGGAVFSESTINQDILQECLKGLQIGPETE
GTAGFEPPPEQQQLPNQVVIGGYALPGQQQYPVTIEGAGGEAGLPEQPAPPMGGAVGGAC
GGQLAEQFLHTMIKTSDGDNFKTEFRISVYYRGVKVSEQLVENEAGIRLVYSPEPTGKVL
DHGSGLTLVYLPSPGAMLDQTQASLTQRILDKLGDGLEIGVSGHMVYGLRWGEMKAFWSF
SKFDRSRQPQEISKLQPQPLYMLKEFVRGILDFIEGKDSPPCSLFFCLGEKWPDPDNRPW
EKKLITVEVVLTSMELLKNMAVDGGASSLKSVELQMSLEEMMELC
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattccaaaccactgctcatcccgtggctgcggacccaggttgacagcggcagg
tatcctggtgtcaactggacaaacccggaacgaacagagttctccatcccatggaaacac
gcattaagacaggactcctccgacactgacattctcatctttaaggcctggtcagagtcg
agcaacaatggccaggctcagggagacccgtcagtctggaagaggaacttccgcagcgcc
ctgcgagccaaaggtttcaaaatggttaccgacaacaagaacgatcccgctaacccccat
aaagtgtttcgctggccggaggaggtgacatcagaagctaactcttctgctggatcccag
gacaaagatgactttgatttgttcgaggattgtgtccttcctacacaagagagccaggtt
atcccgtgctttgatgactgcctctaccttccaggaggagctgtattttcagaatccact
atcaatcaggacattctccaggagtgtctgaagggactgcagattggccctgaaacagag
ggaactgcaggctttgagcctcctcccgagcaacagcagctgccgaatcaggttgtgatt
ggtggatacgcgttgcctgggcaacagcagtatccagtaacgattgagggtgcaggcggt
gaagctgggttgcctgagcaaccagcacctccaatggggggagctgtaggaggggcctgt
ggtgggcagctggcggagcagttcctacataccatgatcaagaccagcgatggagataat
ttcaagactgagttcaggatatcagtgtactacagaggagtgaaggtgtctgagcagctg
gttgagaatgaagctggcatccgcctagtctacagccctgaacccactgggaaagttttg
gaccacggctcaggcctgaccttggtctatctgccaagtcctggggccatgttggatcaa
actcaagccagtctgacccaacgcatcctggacaagctgggcgacggtttggaaatagga
gtgtcgggacatatggtgtacggcctgcgatggggtgaaatgaaagcgttttggagcttc
tctaagtttgatcggagcagacagccccaagagatttccaaactgcagcctcaaccactt
tacatgttgaaggagtttgtgcgaggaatattggacttcattgaggggaaagacagccct
ccctgctccctgttcttctgcctcggggagaagtggcctgacccagacaacagaccctgg
gagaagaaactcatcacagtggaggtggtgctgacttcaatggagttactgaagaatatg
gctgttgatggtggcgcctcctccctgaagtctgtagagctgcagatgtcactggaggag
atgatggagttgtgctga
DBGET
integrated database retrieval system
