Seriola lalandi dorsalis (Yellowtail amberjack): 111661462
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Entry
111661462 CDS
T06058
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04115
p53 signaling pathway
slal04145
Phagosome
slal04148
Efferocytosis
slal04350
TGF-beta signaling pathway
slal04510
Focal adhesion
slal04512
ECM-receptor interaction
slal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111661462
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111661462
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111661462
04148 Efferocytosis
111661462
09143 Cell growth and death
04115 p53 signaling pathway
111661462
09144 Cellular community - eukaryotes
04510 Focal adhesion
111661462
09142 Cell motility
04820 Cytoskeleton in muscle cells
111661462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111661462
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
slal00536
]
111661462
Membrane trafficking [BR:
slal04131
]
Endocytosis
Phagocytosis
Opsonins
111661462
Glycosaminoglycan binding proteins [BR:
slal00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111661462
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
EGF_3
Laminin_G_3
cEGF
TSP1_ADAMTS
EGF
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
111661462
NCBI-ProteinID:
XP_023270805
Ensembl:
ENSSLDG00000023190
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MKLTGIFLLLMLWTCESARVAESRDDNSVYDLFELIQVPKKNHGVTLVKGDDPYSPAYRI
LNPDLIPPVPESAFRDLIDSIHAERGFLLLLNFKQSKRTRGSLLTVEKQDGSGPVFEIVS
NGKANTLDILFSTENKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYAGCEEVNTAELDA
PIQSILTQETPASARLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQSSMTSDTM
ILENLNGSSAIRTEYTGHKTKDLQMVCGFSCEDLVSMFKELKSLGVVVKELSNDLRKLTD
ENKLIMTRIGIRSGVCIHNGIVHKNKDEWTVDDCTECTCQNSATVCRKISCPLIPCANAT
VPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQTR
DCYLQECDKRFKQDGGWSHWSPWSSCSVTCGSGVITHIRLCNSPTPQFGGKDCEGEGRQT
EKCQMSPCPINGNWGPWSPWDTCSLTCGGGDQTRKRLCNDPAPKYNGKECVGEATETQKC
NKKACPIDGCLSNPCFAGAKCTSFPDGSWKCGKCPAGYTGNGIKCKDVDECKEVPDACFE
FNGVHRCENTEPGYNCLPCPPRYSGPQPFGRGVEQAAAKKQVCTPRNPCLDGSHDCNKNA
RCNYLGHFADPMYRCECKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCPNL
PNSGQEDYDKDGIGDACDNDDDNDGIPDDRDNCPFVYNPRQYDYDRDDVGDRCDNCPYNS
NPDQTDTDNNGEGDACAVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLEHN
PDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDND
GVPDEKDNCRLAFNPDQKDSDGDGRGDACKDDFDQDNVPDIYDVCPENFGISETDFRQFQ
MVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYHEFNAVDFSGTFFINTERDDD
YAGFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNALW
HTGNTPGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSIYDK
TYAGGRLGLFVFSQEMVYFSDLKYECRDV
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacagggatatttttgctgttgatgctttggacctgtgagagtgccagagtc
gcagagagccgagacgacaatagcgtgtatgacttgtttgagctcatccaagtccccaag
aagaaccatggggtcaccctggtgaaaggagacgacccgtacagccccgcctacaggatc
ctcaatccggacctgatccccccagtccccgagagcgcctttagggacctgatcgattcc
atacatgccgagaggggattcctcctgctgctcaacttcaagcagtccaaacggaccagg
ggaagcctcctgaccgtggagaagcaggacggctccggacccgtgtttgagatcgtctcc
aacggcaaggcgaacaccttggacatacttttctccaccgagaacaagcagcaggtggtt
tccatcgaagatgtggatctggccacggggcactggaagaatatcaccttgttcgtgcaa
gaggaccgggcgcagctgtacgcgggatgcgaggaggtgaacaccgcggagttggatgcg
cccatccagagcatcctgacgcaggagacgccggccagcgcgcggctcaggattggcaaa
ggagcagtgaaagacaggttcatgggggtcctacaaaacgtgcggtttgtgttcggaacc
acactggatgccatcctccgcaacaaaggatgccaaagctcaatgacgtctgacaccatg
atcctggagaacctcaacggctcctcagccatcagaacagagtacactggacataagact
aaagacctgcagatggtctgtggcttctcctgtgaggacctggtcagcatgtttaaggag
ctgaagagcctcggtgtggtggtcaaggagttgtccaatgatctccgcaagctgacggac
gagaacaagctgattatgacccgcattggcattcgcagtggcgtctgcatccacaacggc
atcgtgcacaagaacaaagacgagtggaccgttgatgactgcaccgagtgcacttgccag
aactctgctactgtgtgccgcaagatctcctgccccctgatcccctgcgctaacgctact
gttcctgatggagagtgctgcccccgctgtggaacaccgagcgactatgcagaggacggc
tggtcgccgtggtctgaatggacccattgttccgtgtcgtgtgggcggggcatccagcag
cgtgggcgctcctgcgaccgtatcaataacaactgtgagggcacctctgtgcagacccgt
gactgctacctccaggagtgtgacaaacgcttcaagcaagacggtggctggagccattgg
tcaccctggtcttcctgttccgtcacctgtggttctggtgtcatcacccatatccgcctc
tgcaactcccccaccccccagtttggaggcaaggactgcgagggagagggtcgacaaact
gagaagtgtcagatgtctccgtgccccatcaatggcaactggggaccatggtcaccatgg
gatacctgctctctcacctgcggaggtggtgaccagactcgtaaacgcctgtgcaatgac
cccgcaccaaaatacaatggcaaagagtgtgttggtgaagccacagagacccagaagtgt
aacaagaaagcttgccccattgatgggtgcttgtccaacccctgctttgctggagccaag
tgcaccagtttccctgatggttcatggaagtgtggaaagtgtccagctggctacactggc
aatggtatcaagtgtaaagatgttgatgagtgcaaagaggtcccagatgcttgctttgag
tttaatggtgtgcaccgctgtgagaacacagaacctggttacaactgtctgccctgccct
cctcgctactcaggaccccagccctttggcagaggtgtggagcaggctgctgctaagaaa
caggtgtgcacaccccgtaatccctgccttgatggaagccacgactgcaacaaaaacgcc
cgctgcaactaccttggacacttcgctgatcccatgtaccgctgtgagtgcaagcccggt
tatgctggcaacggacatatttgtggagaggacacagacctggatggatggccgaacgct
gacctggtttgtgtggagaatgccacctaccactgcaaaaaggacaactgccccaacctc
cccaactctggccaggaagattacgataaggacggcattggagatgcttgtgacaatgat
gacgacaacgatggcattcctgatgatagggacaactgtccattcgtctacaaccccagg
cagtatgattatgaccgtgatgacgtgggtgaccgctgtgacaattgcccctacaacagt
aacccagaccagacagacacagacaacaacggagagggagatgcctgtgctgtggacatc
gatggcgatggtatactaaatgaaaaagacaactgtccctatgtgtacaatgtggaccag
agagacacggatctggacggagtgggagacatgtgcgataactgccctctggaacataat
cctgatcaggtggattcagatgatgaccgtgtaggagataagtgtgatagcaaccaggac
attgatgaggacggacatcagaacaatctggacaactgcccatacatccccaatgccaac
caggctgaccacgacaaagacggcaagggagacgcctgcgaccatgatgacgacaatgat
ggtgtccctgatgaaaaggacaactgcagactggccttcaaccctgaccaaaaagactct
gatggtgatggccgtggagatgcttgcaaagatgactttgaccaagacaatgtgcctgac
atctatgacgtgtgcccagagaactttggcattagtgagacagacttccgccagttccag
atggttcctttggacccgaaaggcacctcccagattgatcctaactgggttgtccgccat
cagggaaaagagctggttcagactgtcaactgtgaccctggcattgctgtcgggtaccac
gagttcaatgcagtggatttcagtgggactttcttcatcaacacagagagggatgatgat
tatgccggctttgtgtttggctaccaatccagttccaggttctatgtggtgatgtggaag
caaattacgcagacctactggtcgaataaacccaccaaggcccagggttactctggcctg
tccattaaagtggttaactccaccactggcccaggagagcacctcagaaatgctctctgg
cacaccgggaatacccctggacaggtccgcactctctggcatgaccccaagaatgttgga
tggaaagatttcactgcctacagatggcatctgatccacagaccgagaacaggacatatt
agagttgtgatgtatgagggcaaaaagatcatggctgattctggcagcatctatgacaag
acatatgcaggtggcaggctaggtctttttgtcttctcacaagagatggtatacttctca
gacctcaagtatgaatgcagagatgtataa
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integrated database retrieval system
