Seriola lalandi dorsalis (Yellowtail amberjack): 111662801
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Entry
111662801 CDS
T06058
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
slal04515
]
111662801
Cell adhesion molecules [BR:
slal04515
]
Cadherins
Protocadherins
111662801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Bact_surface_Ig-like
Motif
Other DBs
NCBI-GeneID:
111662801
NCBI-ProteinID:
XP_023272550
Ensembl:
ENSSLDG00000024698
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MDSRQRKRSGGGRLWRICFYLACLSCASAQLSYSVSEELSPGSVVGNIAKDLSLTAQRID
QRRLRVVSESTTQYFEVKQATGDLVIKQNIDREQMCELSSTCSLHLQILMEDPLEIHRVV
VDILDVNDNAPQFSTSNISLEISEAAAPGTRFRLESAHDPDVGTNSLRTYHLAANDFFTL
NVESKSDGSKFPELVVDKPLDRETQAKFRLLLTAVDGGQPEKSGSTLLLIKILDVNDNAP
VFDEPVKKVKLLENVARGTLVTKLNATDADSGNNGEISFLFSKYTPERVLRLFSVDSKSG
EIRVKGDVDYEKATAYHITVQARDGGSPAMEGSCNVIVDIIDVNDNAPEVTLTSLTSPIR
EDSAPETVIALISARDLDAGENGEVTLTVQPGLPFKLNSAFGMHYSLITAGNLDRETVPE
YTVVIRATDAGSPRLSSQTTFVVKLSDVNDNAPTFSQPSYSVDIPENNAPSAPIAVVSAT
DPDLGDNARISYSILPSMVQGSPISSYVYINPESGHIYSMRSLDHEQLNAFRIEVQARDA
GVPPRTANVTVHVFVVDVNDNAPVIVHPSYPKDKGLHLNVPPSASPGHFIIKLVGMDADS
GHNAWLFYSIGPGPNSGMFRIGAHTGELRTTHKWAEEEGGSVYDIVVIIQDNGDPPKSSS
VNITVTVDEKGTAHDAPASPRHTPFYHRTGMSDITLYLIISLACVSAVSFITFVILMVRC
LRHRDPGLGGSDCCCYGRHRSSRYHQRPSKDLHLQLNTDGPIRYMEVVGGPQEPHTRTYR
PCYSTISSRSDFVFMKTPMLSHNNTLNMTLSRKHLMNSASEQKPPNNDWRFTQGQRPGPS
GPHMPYGTHIRWTPKSGTRATGGPEVAMGTGPWPQPPTEAEQLQALMAAANEVSEATATL
GPGTMGLSTRYSPQFTLQHVPDYRQNVYIPGSTATLTSNPQQQQATAQQATQQALPPPQA
SAQPEPPKAAQTPASKKKSTKKEKK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggactccagacagaggaagcgctccggaggagggaggctgtggaggatttgcttttat
ctagcttgcctctcctgtgcgtccgctcagctcagctattccgtatcggaggaactaagc
ccgggctctgtcgttgggaatatcgctaaagatttgagtctcactgcacagcggattgat
cagagaaggttgcgggtggtctcggagtccacaacgcagtactttgaggtaaagcaggcc
accggcgatttggttattaaacaaaatattgacagggagcaaatgtgtgaactaagttca
acatgttcactacaccttcaaatacttatggaggatcctttagaaattcatcgcgtcgtg
gtggacattctggatgtgaatgacaatgcaccgcagttttctaccagcaacatttctttg
gaaatatcagaggcggctgcgccgggcacgaggttccgtttggagagcgcacacgaccca
gacgtgggtaccaactcgttacgcacttaccatctcgcagcaaatgacttttttactttg
aatgtggaaagtaaaagtgacggcagcaaatttccagagctagtggtggacaaacctttg
gacagggagacgcaggccaagtttcgcctgttgctcactgctgtagatgggggtcagcct
gagaaatctggctcaacacttctgctcattaaaattctggatgtaaatgacaatgctccc
gtctttgacgaaccggtaaagaaagttaagctattagaaaatgttgcacggggcacttta
gtaactaaactgaacgcgactgatgcggattcgggtaacaacggagaaatatctttcctg
ttcagtaaatatacaccggaacgggttctcagacttttcagtgtggattctaaaagtggg
gagatccgtgtgaagggtgatgtagattatgagaaagctactgcatatcacatcaccgtg
caggccagagatggtggctctcctgctatggagggctcctgtaacgtcatcgtggacatc
atcgatgtgaatgacaacgcaccagaggtgacactgacatcattgaccagccctatcaga
gaggactctgcaccagagacagtgatagcgctcataagtgcacgggatctggacgctggt
gagaatggggaggtcacattaactgtccaaccaggtttgccattcaaacttaattcagct
tttggcatgcattacagcctcatcactgctggcaacctggaccgtgagactgtcccagag
tacacagtggtcatcagggcaactgatgctggttcccctcgcctttcatcacaaactacc
tttgtggtaaagctctccgatgtgaatgacaatgctcccaccttctctcagccttcatac
tctgtggacatcccggagaacaatgctcccagtgcccccatcgctgttgtttcagccact
gacccagaccttggcgacaatgctcgcatctcttactccatccttcccagcatggtccag
ggctcacctatttcttcttatgtctacattaacccagagagtggccacatctacagcatg
cgctctctggatcatgaacagcttaacgctttccgtattgaggtgcaggcccgggatgct
ggggtgcccccacggacagccaacgtcactgtgcatgtgtttgtggtggatgtgaatgac
aatgcaccagtgattgtacacccctcttacccaaaagacaaaggattacacctcaatgtc
ccaccgtcagccagcccaggacacttcataattaaacttgtagggatggatgcagacagt
gggcacaacgcatggctgttttactctatcggccctggaccaaattccggtatgttccgt
attggggcgcacaccggggagctccgcacaacccacaagtgggctgaggaggaagggggc
tcagtttatgacattgtggtcatcattcaggacaatggtgacccaccaaagtccagttct
gtgaacattacagtaactgtggatgagaagggcacagcccacgatgctccagcaagccct
cgccacacacccttttaccaccgcaccgggatgtcggacatcaccctgtacctcatcatc
tctttagcctgtgtatcagctgtttcctttatcacctttgtcatcctcatggtacgctgc
ctaaggcaccgtgacccaggcctgggaggctctgactgctgctgctacggtcgccacagg
tccagccgctatcatcagaggcccagcaaggacctgcacctgcagctcaacactgatgga
cccatacgttatatggaggttgtgggaggcccccaggagccacacacacgcacttacagg
ccctgctattccaccatatccagccgaagtgactttgtatttatgaagacacccatgctg
agtcacaacaacacactcaacatgacactcagcaggaagcaccttatgaactcagccagt
gagcaaaagccccccaacaatgactggcgcttcacacagggacagagacctggacctagt
ggtccccacatgccatacggtacacacatacgatggacgccgaagagtgggacaagggca
actggaggacctgaggttgccatgggaactggcccctggccccagccccctactgaagct
gagcagctccaggccctgatggctgcagccaacgaagtgagtgaggctacggccaccctg
gggcctggcaccatgggccttagcacccgctacagtccccaattcactctgcagcacgtg
cctgactaccgccagaacgtctacatccccggcagcactgccaccctgacctccaacccc
cagcagcagcaggccacagcccagcaggccacccagcaggcgctgcccccgccccaggcc
tcagcccagcccgagccccccaaggccgcccagacccctgcctccaagaagaagtccacc
aagaaggagaagaagtag
DBGET
integrated database retrieval system
